Gene Pfl01_2500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2500 
Symbol 
ID3712190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2859040 
End bp2859744 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content66% 
IMG OID 
ProductTonB-like 
Protein accessionYP_348231 
Protein GI77458725 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCAC AACTGCCAAT CGAGCCTTTG CCGGTGAAGA AGTCGCCACT GCGTTACGTG 
AAGTGGGGCG CCGGGCTGCT GCTGGGTGCC GTCGCGGCAT TCCTGTTGTG GCAGTGGGCC
AACGACATGA GCGGCATCCG CCGGGAAGCG CCGAAGGTGC CGACGATCAT TCCGTTGCCG
CCACCGCCAC CTCCGCCGCC GGAAAAACCG CCGGAGCCGG AAACCCCGGT GGAAGAAAAA
ATCGTCGAGC CCGAGCCGAC GCCCGAGCCG CAGGAAGTGA AACCCGAGGA AGAGGCGCCG
CCATCGCCGG CGGACGATCT GGCCAACCCG ATGCAAATCG ACGGCGACGC CCAGAGCGGC
AGCGACGCGT TCAACATCGG CGCGGGCAAG GGCGGCGGCA TGGCCGGATC CGGCGGTGGG
CGACTGGGCA ACGGCACCTA TAGCCAGTTC CTCGCGTTCA CTTTCCAGAA GCTGCTGCGC
GAGAACCCCG ATCTGCGCAA CCTCGCGTTT TCGCTGCAGG CCGATGTGTG GCTGAGCAGC
GTCGGCGAGA TCACCCGGGT CGAGCTGATC AAGTCCAGCG GCAACCCCGA AATCGATACG
CAAGTGCTCG CCGCGCTGCG CAATGCGCCG GCGTTAAGCG AACGGCCACC GGCCTCCATC
ACCTTGCCTG TGCGCATGTC CCTGCAAGGG CGGCGTCCGG GTTAA
 
Protein sequence
MTAQLPIEPL PVKKSPLRYV KWGAGLLLGA VAAFLLWQWA NDMSGIRREA PKVPTIIPLP 
PPPPPPPEKP PEPETPVEEK IVEPEPTPEP QEVKPEEEAP PSPADDLANP MQIDGDAQSG
SDAFNIGAGK GGGMAGSGGG RLGNGTYSQF LAFTFQKLLR ENPDLRNLAF SLQADVWLSS
VGEITRVELI KSSGNPEIDT QVLAALRNAP ALSERPPASI TLPVRMSLQG RRPG