Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2363 |
Symbol | |
ID | 3715454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2721510 |
End bp | 2723039 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_348095 |
Protein GI | 77458590 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.121084 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGATA CCCTTGTTAA TTCTGCCCAG CGTGCCCCGG TCGATGTGAT CGTGGTGGGC GGCGGTTCCG CCGGCGCGGT ACTGGCCCGT CGCTTGAGTG AAAACGTCCG GCGCCAGGTG CTGTTGCTGG AGGCGGGTCA GAGTTTTGCC CCGGGCAAGT ACCCCGAAAT CGTCGCCAGT AGCGATGTGG TCGGTGCCAA TGGCAATCGC CAGTTCGAGT GGGGTTACAC CTCCCGGCCG GGCTATGTCG AACACCCGAT CGGCGCGTTG CGCGGCAAAG TGCTGGGCGG CAGTTCGGCC ATCAACGGCG CGGTGGCGAT TCGCGCCCGA GCCACGGACT TCCAGCGCTG GAATCTGCCG GGCTGGAGCT TTGAGGACTT GCTGCCCTCG TTCAAAAAAC TGGAAAACCA CAGCGGCGGA GCCAGCGCAT TGCATGGCCA CGACGGGCCG CTGCCGGTGC GTCAGCTCGG CAGCGCCGAC GTCACACCAA TGCAGAAAGC CTTCATCTAC GCCACGGTCG CCAACGGTTA CCGGATGATC GACGACTTCG ACGGCGCGAA TGCCAACGGC GTCGGCCCGT ACCCGATGAA CATCGTCGAC GGCGTGCGGG TCAACACCGG CATGGCTTAC CTCACGGACG AGGTGCGCGC CCGCGACAAT TTGCAGATTC GCGCCGACAG CCTGGTGGAC AAGGTGCTGT TCGACGGCAA ACGTGCGGTG GGTGTGCAAC TGGCGAATGG CGAGCAATTA CGCGCCAACG AAGTGATTCT TTCGGCGGGC AGTTACGGCA GCGCGGCGAT CCTGTTGCGC TCCGGTATCG GCCCTGGCGA CGATCTGCGC GCACTGGACA TTGAGCCGGT CGCCGAATTG CCGGTCGGGC AGAACCTGGC GGATCACCCG TTCTATTACA ATGCCTACGC CGCCAAACCC GACCTGATCG GTCGCCAGTC GCCGGCCATA GGCGCCAAGC TCTGGACCCA CAGCCGCAGC GCCGAGCACG GCGATCTGGA TATTCACATC ACCGCGACCC ACCTGTTCCC CCATGACCAG AGCCCGACCC AGGTGGGCTT CGTGCTCGCG GTGGCGCTGA CCCGGCCGCT GTCCCGAGGC AAGGTTACGC TGGCCAGCCG CGATCCGTCG GTGGCGCCGA ATATCGATCT GAATTTTCTC GCCGAGCCCA TGGACCGCCA GCGCCTGCTG GACGGTATTC GTCTGGCACG GCGGATCGGT GCGACCGCGC CGCTCAAGGG TTTGATTCAC TCGGAGCTGA ATCCGGGGCA GGGCAACGAC TCCGACGACG CCTTGCTGGC CAGCGTCAAA GCCACGCTCG ACACCTATCA CCACCCGACC TCGACCGCGC CGATGGGCCG GCCGGGCGAT GCCATGGCCG TGGTCGACCT CGAAGCCCGA GTAATCGGCG TGCAGGGCCT GCGGGTGGTC GACGCTTCCA TCTTCCCGGA CGTGCCGTCC GTTGCCACCA ACCTCACCGT GATCGCCACC GCCGAAAAAA TCGCCGGTCT CTACGCCTGA
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Protein sequence | MNDTLVNSAQ RAPVDVIVVG GGSAGAVLAR RLSENVRRQV LLLEAGQSFA PGKYPEIVAS SDVVGANGNR QFEWGYTSRP GYVEHPIGAL RGKVLGGSSA INGAVAIRAR ATDFQRWNLP GWSFEDLLPS FKKLENHSGG ASALHGHDGP LPVRQLGSAD VTPMQKAFIY ATVANGYRMI DDFDGANANG VGPYPMNIVD GVRVNTGMAY LTDEVRARDN LQIRADSLVD KVLFDGKRAV GVQLANGEQL RANEVILSAG SYGSAAILLR SGIGPGDDLR ALDIEPVAEL PVGQNLADHP FYYNAYAAKP DLIGRQSPAI GAKLWTHSRS AEHGDLDIHI TATHLFPHDQ SPTQVGFVLA VALTRPLSRG KVTLASRDPS VAPNIDLNFL AEPMDRQRLL DGIRLARRIG ATAPLKGLIH SELNPGQGND SDDALLASVK ATLDTYHHPT STAPMGRPGD AMAVVDLEAR VIGVQGLRVV DASIFPDVPS VATNLTVIAT AEKIAGLYA
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