Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2360 |
Symbol | |
ID | 3715508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 2717856 |
End bp | 2719274 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | isopropylmalate isomerase large subunit |
Protein accession | YP_348092 |
Protein GI | 77458587 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.116288 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAGCC CGAGAACGCT GTACCAGAAG CACATCGACA GTCACACCGT CTGCACCCTC GACGATCAGG GCCACGTGCT GCTTTACATC GACCGCCAGG TCGCCAACGA ATACACCAGC CCGCAAGCCT TCAGCGGCCT GCGCGAGGCC GGGCGCACGG TGTGGCGGCC TGCGGCGACG CTGGCGGTGG TCGATCATGT GAACCCCACC GCACCGAAAC GCATCGCGAC CATGCCCGAC GCCGGGGGCG CGCGGCAGGT GTCGTACTTC GAAGAAAACT GCCGCGACTT CGGCATCGAG CTGTTCGATG TGCTGGACAA GCGCCAGGGC ATCGAACACG TCGTAGCGCC GGAACAGGGT TTCATTTTGC CGGGCATGGT GGTCGCGGCC GGTGACAGCC ACACCACCAC TTACGGCGCA CTGGGAGCGT TCGGTTTCGG CATCGGCACC TCGGAAATCG AGCACCTGCT GGCAACCCAG ACGCTGGTCT ACAAACGTCT GAAAACCCTG CGGGTGACGG TCAACGGCGA ACTGGGCGCA GGCGTCACCT CCAAGGACAT CATCATGGCG CTGATCGAAA AGATCGGCGC GTCCGGCGCC ACCGGTTACG CCATCGAGTT CACCGGCCCG GCCATCAGCG CCCTCAGCGT CGAAGCGCGC ATGACCATCT GCAACATGGC CGTCGAGGCC GGCGCCCGGG GTGCGTTCAT GGCACCGGAT GACAAGGTGT TCGCCTACCT GCAACACAAG CCGCGTGCGC CCAAGGGCAA GCTCTGGGAG CAGGCCATCG ATCACTGGAA AACCCTGCAC AGCGATGAGG GCGCAGTGTT CGATCGCGAA GTCATCCTTG ATGTCGCCGA GCTGGAACCA ATGGTGACCT GGGGCACCAG CCCCGATCAG GCCGCGCCGA TCAAGGCACA CGTGCCGGAT CCGGCCGCCC AGCCCGATCC GATCCTGCGT CAGGGCCTGC AGCGCGCCCT CGACTACATG GGGCTGACGC CCGGCATGCC GCTGAACGAA GTGACGATCA GCCATGCCTT CATCGGTTCC TGCACCAATG CGCGGATCGA AGATTTGCGT GATGTTGCCC GCGTGGTGCG CGGCAAGCGT GTGGCGGCCC ACGTGCGGGC GATGATCGTT CCCGGCTCGA CGTTGGTGCG CAATCAGGCC GAGGACGAAG GCCTGGCGCA GATCTTTCTC GACGCCGGTT TCGAATGGCG GCAATCGGGT TGCTCGATGT GCCTGGCGAT GAACGACGAC GTGCTCGCGC CAGGTGATCG CTGTGCGTCG AGCACCAATC GCAACTTCGA AGGCCGTCAG GGCGCCGGTG CGCGCACCCA CCTGATGAGC CCGGCGATGG TCGCCGCCGC CATCAGCGGC CATTTGACTG ACGTGCGCAC CGTCGCGCTG GAGGCTTGA
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Protein sequence | MPSPRTLYQK HIDSHTVCTL DDQGHVLLYI DRQVANEYTS PQAFSGLREA GRTVWRPAAT LAVVDHVNPT APKRIATMPD AGGARQVSYF EENCRDFGIE LFDVLDKRQG IEHVVAPEQG FILPGMVVAA GDSHTTTYGA LGAFGFGIGT SEIEHLLATQ TLVYKRLKTL RVTVNGELGA GVTSKDIIMA LIEKIGASGA TGYAIEFTGP AISALSVEAR MTICNMAVEA GARGAFMAPD DKVFAYLQHK PRAPKGKLWE QAIDHWKTLH SDEGAVFDRE VILDVAELEP MVTWGTSPDQ AAPIKAHVPD PAAQPDPILR QGLQRALDYM GLTPGMPLNE VTISHAFIGS CTNARIEDLR DVARVVRGKR VAAHVRAMIV PGSTLVRNQA EDEGLAQIFL DAGFEWRQSG CSMCLAMNDD VLAPGDRCAS STNRNFEGRQ GAGARTHLMS PAMVAAAISG HLTDVRTVAL EA
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