Gene Pfl01_2280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2280 
Symbol 
ID3715621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2630141 
End bp2632108 
Gene Length1968 bp 
Protein Length655 aa 
Translation table11 
GC content64% 
IMG OID 
ProductBeta-lactamase-like 
Protein accessionYP_348012 
Protein GI77458507 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCGA CCCTCTACAC GATCCTTGCC CTGACGCTGG TGTCCCTCGC CGGCTGCGAC 
AACAAGCCCA GCGTCGCAGC CGGCGACGCC ACGCCCGCCA CGGCCGCGGT GATCCAGGCG
TCGATCAAGG GCCTGGACCT CAGCGACAAC CGTGACATGG AAGATGCCCA GCGCGGTTTC
ATCGCCCGGC CCACCGGCAA GATCCTTGGC GCTGACGGCA ATGTCCTGAT CGATTTCGAT
GCGTACCGCT TCGTCGAAGG CCAGGCGCCG ACCACCGTCA ACCCGAGCCT GTGGCGACAC
GCGATGCTCA ACGCACAGAT CGGCCTGTTC AAGGTCCGCG AGGGCATTTA CCAGTTGCGT
GGTTTCGACA TCGCCAACAT GACGCTGATC GACGGGCAAA CCGGCTGGAT CGTGGTCGAC
CCGCTGACCT CCCGGGAATC CGCCGCCGCA GCGCTGGCCT TCGCTCGCGA GCATCTGGGC
AACAAGCCTG TCACCGCGAT CATTTTCACC CACGACCATG CCGACCATTT CGGCGGTGTG
CTGGGCATCA CTTCGGCCAG CGAAGTGGCC CAGCGCAACA TTCCCATCGT CGCGCCCGCC
GGGTTCATGG AGGAAGCCAC CAGCGAAAAC ATTCTGGCGG GGCCGGCGAT GGCGCGGCGT
TCGATGTATC AGTTCGGCAA GAACCTGACG CCGGGCGCCA CCGGCATTGT CGACACCGGG
CTGGGCAAGA ACGTTGCGTA CGGCAGCATG GGCATCCTGC CGCCAACGCA GATCATCGAC
CAGCCGATCC AGCCGCTGGT GCTCGACGGC GTCAGCTTCG TGTTCCACAA CATGCCCGGC
GCGGAGGCCC CGGCCGAGCT GACCTTTTCG ATCCCCGCGC TCAAGGCATA CGGCGGTGCG
GAGCTGCTGA CGCAGACCAT GCACAACCTG CTGCCGATCC GTGGCGCCAA GGTCCGCGAT
GCGCTGCGCT GGTCCGACTA CATGCAAATC GCCCTCGACG AGCTGGGCGA CACCGAGGTC
TATTTCGGTC AGCACAACTG GCCGATCTGG GGCAACGAGC GGATCCGCGA ATTCATCACC
AAACACCGCG ACGTCTACAA ATACCTGCAC GACCAGACCG TGCGCCTGAT GAACGCCGGC
TACACCCCCA ACGAGATCGC CGACAAGATC CAGCTGCCGG ATTCGCTGGC CTCGTACTTC
GGCACTCGCG GCTATTACGG CGACCTGCGC CACAACGTCA AGGCGATCTA CCAGCTGTAC
CTGGGCGCCT ACGACGGCAA CCCCGCGCAC TTGAATCCGC TGGTGCCCAA GGAGTCGGCA
AAGCGCTACG TCGAATTGAT GGGAGGTAAC GCCAAGGTGG TCGAAGCCGC GCGCGTGGCC
TATGACAAGG GCGAATATCG CTGGGTCGCC GAGCTCCTGG ATCAGGCCGT GCTGGCCAAA
CCCGACGACA CCGCCGCCAA GGAACTGCTG GCCCGCGCGT ACGAACAGAT GGGCTATCAG
GCGGAATCGG CAACCTGGCG CAACAGTTAC CTGACCGCTG CCATGGAGCT GCGCAACGGC
CCCCCGGCCA AGGGCGTCAA ACGCTCCGAC CTGATCGAAC TGATGAAGCA GACGCCCACC
GAACGCTTCC TCGAAGCCAT GGCCGCGAGC CTCGACGGGC CGGCGGCGGA TGGCAAGAAC
TGGACCTTCA ATCTGGTGCT GACCGATACG AATGAATCGT TCGTGCTGTG GATCGAGAAC
GCCGTGCTGC ACTACCGAAA AGGCCCGACG GCGGCGAACG CCAACGCAAC GCTGAGTGTC
ACCAAGGACC TGTTCGTCCA ACTGCTGGGC GGCACCGCCG GGCTGAAGGA GGCATTCACC
TCCGATGATC TGAAGGTGGA TGGCAGCAAG GTCGATCTCG TGAGATTTCT GGGGCTGTTG
GAAAAGGCGC CGGGGAATTT TGCGATAGTC GCCCGGGCAG GAAACTGA
 
Protein sequence
MKPTLYTILA LTLVSLAGCD NKPSVAAGDA TPATAAVIQA SIKGLDLSDN RDMEDAQRGF 
IARPTGKILG ADGNVLIDFD AYRFVEGQAP TTVNPSLWRH AMLNAQIGLF KVREGIYQLR
GFDIANMTLI DGQTGWIVVD PLTSRESAAA ALAFAREHLG NKPVTAIIFT HDHADHFGGV
LGITSASEVA QRNIPIVAPA GFMEEATSEN ILAGPAMARR SMYQFGKNLT PGATGIVDTG
LGKNVAYGSM GILPPTQIID QPIQPLVLDG VSFVFHNMPG AEAPAELTFS IPALKAYGGA
ELLTQTMHNL LPIRGAKVRD ALRWSDYMQI ALDELGDTEV YFGQHNWPIW GNERIREFIT
KHRDVYKYLH DQTVRLMNAG YTPNEIADKI QLPDSLASYF GTRGYYGDLR HNVKAIYQLY
LGAYDGNPAH LNPLVPKESA KRYVELMGGN AKVVEAARVA YDKGEYRWVA ELLDQAVLAK
PDDTAAKELL ARAYEQMGYQ AESATWRNSY LTAAMELRNG PPAKGVKRSD LIELMKQTPT
ERFLEAMAAS LDGPAADGKN WTFNLVLTDT NESFVLWIEN AVLHYRKGPT AANANATLSV
TKDLFVQLLG GTAGLKEAFT SDDLKVDGSK VDLVRFLGLL EKAPGNFAIV ARAGN