Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2280 |
Symbol | |
ID | 3715621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 2630141 |
End bp | 2632108 |
Gene Length | 1968 bp |
Protein Length | 655 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | Beta-lactamase-like |
Protein accession | YP_348012 |
Protein GI | 77458507 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCGA CCCTCTACAC GATCCTTGCC CTGACGCTGG TGTCCCTCGC CGGCTGCGAC AACAAGCCCA GCGTCGCAGC CGGCGACGCC ACGCCCGCCA CGGCCGCGGT GATCCAGGCG TCGATCAAGG GCCTGGACCT CAGCGACAAC CGTGACATGG AAGATGCCCA GCGCGGTTTC ATCGCCCGGC CCACCGGCAA GATCCTTGGC GCTGACGGCA ATGTCCTGAT CGATTTCGAT GCGTACCGCT TCGTCGAAGG CCAGGCGCCG ACCACCGTCA ACCCGAGCCT GTGGCGACAC GCGATGCTCA ACGCACAGAT CGGCCTGTTC AAGGTCCGCG AGGGCATTTA CCAGTTGCGT GGTTTCGACA TCGCCAACAT GACGCTGATC GACGGGCAAA CCGGCTGGAT CGTGGTCGAC CCGCTGACCT CCCGGGAATC CGCCGCCGCA GCGCTGGCCT TCGCTCGCGA GCATCTGGGC AACAAGCCTG TCACCGCGAT CATTTTCACC CACGACCATG CCGACCATTT CGGCGGTGTG CTGGGCATCA CTTCGGCCAG CGAAGTGGCC CAGCGCAACA TTCCCATCGT CGCGCCCGCC GGGTTCATGG AGGAAGCCAC CAGCGAAAAC ATTCTGGCGG GGCCGGCGAT GGCGCGGCGT TCGATGTATC AGTTCGGCAA GAACCTGACG CCGGGCGCCA CCGGCATTGT CGACACCGGG CTGGGCAAGA ACGTTGCGTA CGGCAGCATG GGCATCCTGC CGCCAACGCA GATCATCGAC CAGCCGATCC AGCCGCTGGT GCTCGACGGC GTCAGCTTCG TGTTCCACAA CATGCCCGGC GCGGAGGCCC CGGCCGAGCT GACCTTTTCG ATCCCCGCGC TCAAGGCATA CGGCGGTGCG GAGCTGCTGA CGCAGACCAT GCACAACCTG CTGCCGATCC GTGGCGCCAA GGTCCGCGAT GCGCTGCGCT GGTCCGACTA CATGCAAATC GCCCTCGACG AGCTGGGCGA CACCGAGGTC TATTTCGGTC AGCACAACTG GCCGATCTGG GGCAACGAGC GGATCCGCGA ATTCATCACC AAACACCGCG ACGTCTACAA ATACCTGCAC GACCAGACCG TGCGCCTGAT GAACGCCGGC TACACCCCCA ACGAGATCGC CGACAAGATC CAGCTGCCGG ATTCGCTGGC CTCGTACTTC GGCACTCGCG GCTATTACGG CGACCTGCGC CACAACGTCA AGGCGATCTA CCAGCTGTAC CTGGGCGCCT ACGACGGCAA CCCCGCGCAC TTGAATCCGC TGGTGCCCAA GGAGTCGGCA AAGCGCTACG TCGAATTGAT GGGAGGTAAC GCCAAGGTGG TCGAAGCCGC GCGCGTGGCC TATGACAAGG GCGAATATCG CTGGGTCGCC GAGCTCCTGG ATCAGGCCGT GCTGGCCAAA CCCGACGACA CCGCCGCCAA GGAACTGCTG GCCCGCGCGT ACGAACAGAT GGGCTATCAG GCGGAATCGG CAACCTGGCG CAACAGTTAC CTGACCGCTG CCATGGAGCT GCGCAACGGC CCCCCGGCCA AGGGCGTCAA ACGCTCCGAC CTGATCGAAC TGATGAAGCA GACGCCCACC GAACGCTTCC TCGAAGCCAT GGCCGCGAGC CTCGACGGGC CGGCGGCGGA TGGCAAGAAC TGGACCTTCA ATCTGGTGCT GACCGATACG AATGAATCGT TCGTGCTGTG GATCGAGAAC GCCGTGCTGC ACTACCGAAA AGGCCCGACG GCGGCGAACG CCAACGCAAC GCTGAGTGTC ACCAAGGACC TGTTCGTCCA ACTGCTGGGC GGCACCGCCG GGCTGAAGGA GGCATTCACC TCCGATGATC TGAAGGTGGA TGGCAGCAAG GTCGATCTCG TGAGATTTCT GGGGCTGTTG GAAAAGGCGC CGGGGAATTT TGCGATAGTC GCCCGGGCAG GAAACTGA
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Protein sequence | MKPTLYTILA LTLVSLAGCD NKPSVAAGDA TPATAAVIQA SIKGLDLSDN RDMEDAQRGF IARPTGKILG ADGNVLIDFD AYRFVEGQAP TTVNPSLWRH AMLNAQIGLF KVREGIYQLR GFDIANMTLI DGQTGWIVVD PLTSRESAAA ALAFAREHLG NKPVTAIIFT HDHADHFGGV LGITSASEVA QRNIPIVAPA GFMEEATSEN ILAGPAMARR SMYQFGKNLT PGATGIVDTG LGKNVAYGSM GILPPTQIID QPIQPLVLDG VSFVFHNMPG AEAPAELTFS IPALKAYGGA ELLTQTMHNL LPIRGAKVRD ALRWSDYMQI ALDELGDTEV YFGQHNWPIW GNERIREFIT KHRDVYKYLH DQTVRLMNAG YTPNEIADKI QLPDSLASYF GTRGYYGDLR HNVKAIYQLY LGAYDGNPAH LNPLVPKESA KRYVELMGGN AKVVEAARVA YDKGEYRWVA ELLDQAVLAK PDDTAAKELL ARAYEQMGYQ AESATWRNSY LTAAMELRNG PPAKGVKRSD LIELMKQTPT ERFLEAMAAS LDGPAADGKN WTFNLVLTDT NESFVLWIEN AVLHYRKGPT AANANATLSV TKDLFVQLLG GTAGLKEAFT SDDLKVDGSK VDLVRFLGLL EKAPGNFAIV ARAGN
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