Gene Pfl01_2232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2232 
Symbol 
ID3715651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2560811 
End bp2562937 
Gene Length2127 bp 
Protein Length708 aa 
Translation table11 
GC content61% 
IMG OID 
ProductTonB-dependent siderophore receptor 
Protein accessionYP_347964 
Protein GI77458459 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGAA CTCTGCTGTC CATCTGCGTG TTGCAAACGT TGTCTCCCTT GGCGTGGGCC 
GAGCCATCCG ATTCAACGGT GTCAGCGCTG GAGCTGGAGG CAACCGATGT GGTCGGTACC
GCGGATTACG AAAGAGCGGA CGGCCCGGTA CAGGGATATC GCGCGACCCG TTCGGCCAGC
GCTACCCGAA CCGATACCTC GATCCATGAA ACCCCGCAGT CGATCAGCGT CGTCACCAAA
GATGCGGTCG AAGACATCGG TGCTACCCGG CTGCAGGACG CACTGGATTA CGCGGGCGGA
GTAGGGCGAG CCAACAATTT CGGCGGCCAG GGACTGACCA CGTTCACCGT GCGCGGATTT
ACCACTGGCG AGTTCTACCG CAATGGTTTC CCGATCAACC GCGGTTATCC GAACATGCCG
GATGCCAACA CCATCGAGCG ACTTGAGGTC CTGCGCGGTC CGGCGACCAT GCTCTACGGC
CGGGGCGATC CGGGCGGTAC CTTCAATGTC GTTTCCAAAC AACCGTTGCC CGAGCGTACG
GTCACACTCG GCAGCCAGCT GAATGACCAA GGCATGCGCC GCGGCACCCT GGATGCTTCC
GGTCCGCTCG ATGAAGAGGG GCGTCTGGCC TATCGCCTGA ACGTGGTGGG CGAGGGCGGC
GATACCTTCC GCGATCACGT CGAAACCGAA CGCTACGGCG TGACCCCCGT GCTGACCTGG
CAAGCCAGCG ATGACACCCG AGTGATCTTC GAGGGTGACT TCATGCGCAA CAACCATCCG
CTGGACCGGG GCGCGACGCG TTATCCCCGG CAGATCGGCA CTGCCTCCCG CGACACCTTC
TTCGGTGAAC CGGACGCTGG CAAGTTGCAC AACGACAACA ACATGGCGCA ATTGCGCTTC
GAGCATGTGC TCAATGAGGA CTGGACGCTC GGCGGTGGCT TCCAGTGGCT CGACGGTACC
TTGCAGGGCA ATGCCATTGA AGCCAACGGC ATTGCCGCCG ACGGCCGGAC TCTGGGACGA
AATTTCAACT ACCGCAAGCT GGAGTGGACG GACAAGGACA CCCAACTCAA CCTGACCGGT
CACTTCTCCA CCGGCGGCCT GCAGCACACA TTGCTGACCG GTATCGAATA CGAAGATTAC
GACTACCAGT CGATCATCCA GCGCTCCAGC GGCGCGGTGA GTGCCTATCC GATCGATATC
TTCAATCCGG TCTATGGGCA GCCCCGTCCG GCACTGACAC GCACCCCGAC CCACGACAAG
GAAAACCTCA AGACCTACGC CGCGTTCGTA CAGGACCAGG TGGCCCTGAC CGATCGGCTG
AAAGTCCTGG CCGGGGCACG TTTTGAACGC TTTGAACACG ACTACGAAAC CTACGTGCCC
GGCGGCAAGA ACTGGCAGGC CAGTGACAAT GCCGTCACGC CCCGCGTCGG TGTGACCTAT
GACCTAACCG ACACCCTCGC GATTTACGCG GACACCGCGC GTTCCTTCAA GCCCAATACC
GGCGCAAGCC GACAGGGCGG CGGCTTCGAA CCGGAGAAAG GCAAGTCCTG GGAGATGGGC
GTCAAATGGG AAGCGCTGGA TCATCAGCTG AGCGTTGACG CGGCGATCTA TCAGATTGAA
AAGCGCAATG TCCTGACCAC TGACCCGGTG GACTCGACGT TCAGCGTGGC TGCCGGGGAA
GTGCGCAGCC GGGGATTCGA CCTCAATGTC GCCGGCAACC TGACCCCCGA GTGGCGTGTC
ATCGGGGGGT ACGCCTACGT CGATGCCGAG GTGACCAAGG ACAACGTGAT CCGCTCCGGC
ACGCGACTGA TGAACATCCC GAAAAACAGC TTCAGCCTGC TCAACGTCTA TGAGTTCCAG
GACGGTGCCC TCAGTGGTCT GGGTCTGGGG ACAGGCGTCA AATATGTCGA TGAGCGCGCG
GGTCAAACGG CCAACACTGC ATTTTCGATG GGGAGCTACA CCGTTGTCGA CCTGCTCAGC
TACTACAAGG TCAATGACAA GTTACGTCTC AATCTCGACC TGAAGAACCT GTTTGACCGG
GACTACGACG AGGGCGCATT CGGTAACGTC TACGCCTATC CGGGGGCACC GAGAACGGTG
CAGGTCGGCA TTTCCTACAC GTTGTAG
 
Protein sequence
MRRTLLSICV LQTLSPLAWA EPSDSTVSAL ELEATDVVGT ADYERADGPV QGYRATRSAS 
ATRTDTSIHE TPQSISVVTK DAVEDIGATR LQDALDYAGG VGRANNFGGQ GLTTFTVRGF
TTGEFYRNGF PINRGYPNMP DANTIERLEV LRGPATMLYG RGDPGGTFNV VSKQPLPERT
VTLGSQLNDQ GMRRGTLDAS GPLDEEGRLA YRLNVVGEGG DTFRDHVETE RYGVTPVLTW
QASDDTRVIF EGDFMRNNHP LDRGATRYPR QIGTASRDTF FGEPDAGKLH NDNNMAQLRF
EHVLNEDWTL GGGFQWLDGT LQGNAIEANG IAADGRTLGR NFNYRKLEWT DKDTQLNLTG
HFSTGGLQHT LLTGIEYEDY DYQSIIQRSS GAVSAYPIDI FNPVYGQPRP ALTRTPTHDK
ENLKTYAAFV QDQVALTDRL KVLAGARFER FEHDYETYVP GGKNWQASDN AVTPRVGVTY
DLTDTLAIYA DTARSFKPNT GASRQGGGFE PEKGKSWEMG VKWEALDHQL SVDAAIYQIE
KRNVLTTDPV DSTFSVAAGE VRSRGFDLNV AGNLTPEWRV IGGYAYVDAE VTKDNVIRSG
TRLMNIPKNS FSLLNVYEFQ DGALSGLGLG TGVKYVDERA GQTANTAFSM GSYTVVDLLS
YYKVNDKLRL NLDLKNLFDR DYDEGAFGNV YAYPGAPRTV QVGISYTL