Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1673 |
Symbol | |
ID | 3716736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1866127 |
End bp | 1866468 |
Gene Length | 342 bp |
Protein Length | 113 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | XRE family transcriptional regulator |
Protein accession | YP_347405 |
Protein GI | 77457900 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0000189543 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0572625 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATTC AGATAATTGC ACGCGATGGC GAACCCGAAT ATGCGGTTCT GCCATGGGCT CAGTATCAGG CTCTACTGAA AGCAGCAGGC ATTAACGAAG CACCGTCGCA ACCGGCTCCA GCGCCGCTTG CGGCAACCCC GGACCCGATT CTTCCAGGTC TGGATCAGTT ACGCAGTTTG CGCGAAGGGA AGGGCATCGC CATCGAGGCG CTGGCCCGCA CGGTAGGCAT CAGCCCGTCT TACCTGGCCA TGATCGAAAG TGGCGAGCGT CTGCCCGACG CAGCGATTCG CCGCAGCCTG GCCTGGGAGT TGACGGTGCC AGGGTGGAGG GAACAATCGT GA
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Protein sequence | MDIQIIARDG EPEYAVLPWA QYQALLKAAG INEAPSQPAP APLAATPDPI LPGLDQLRSL REGKGIAIEA LARTVGISPS YLAMIESGER LPDAAIRRSL AWELTVPGWR EQS
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