| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1629 |
|---|
| Symbol | |
|---|
| ID | 3716802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 1819581 |
|---|
| End bp | 1820636 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | |
|---|
| Product | amidohydrolase 2 |
|---|
| Protein accession | YP_347361 |
|---|
| Protein GI | 77457856 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0215792 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGTCT GCCGGAGAAC GCTTGTGTCC GTGTTTCGTT TGAGCCTTGC CGTCCTGATG
GTTTTCACCG GCGCCGCCAG CGCCCGGGAA TACACCTACA GTGACGCGCA CCTGCATTAC
GTGGATTTTT TCCAGGAAAC TGCCGGCATG CCGAAATTGC TCACGGCCAT GAAGGAAAAC
TCCATTGAGC ATGTGATGAT TTCCGGCATT CCCGTGGCGA AGAAATGGCA CGAAGACGAG
CCGAAGCGCC CGCGTTATTA CGCTGGCGAT GATGCCGATG CCTATTGGTA CAGCGCGACG
GACGTGATCG TCGCCGACGC GGTGCAGAAG CTCACGCCGG AGCAGCGCCA GTCCTTTCAC
CCGTTTCTTT CAGGCTTCAA CCCCAACGAC AAGAACTCCG CCGCGCACAT TCAGCGCATG
CTCGATCTGT ATCCCGGCTT GTGGCAGGGC ATCGGCGAGG TCTTCACCCG TCACGACGAC
CTGACCGCGC TGACCTCCGG CGACACGCCG CGCGCCAACA ACGAAGCCAT GACCCGCATC
TATCACCTGG CCGCCGAAAA CGATCTGCCG GTGATGCTGC ATTCCAACAT CACTTCCAAG
CGTGAGAAGA ATCCGCTGTA CCTGAAGGAA ATCGAAGAGC CGCTGCGTAA TCATCCGCAC
ACCCGATTCA TTTGGGCCCA TGCCGGCACC AGTGCCGAGA TCCATCGTCA TCAGACGCAA
CTGGATTTTC TGCTGCCGAC CCTGACGCGA ATGCTGGAAG CGTATCCGAA CCTGTTCATC
GATCTGTCGT GGAGCCTGCT GACGCCTTAT CTGCTGGACG AAAAGGGCCA GCCGCGAGCG
GAGTGGGTGC AACTGGTGGA GCGCTATCCG GATCGCTTCA TGATCGGTTC GGACGTGGTC
GGGCGATTCA ACAAACTCGG TAAGGAAATT CATAGCTTCA AGCCGTTTCT CGACGCCTTG
CCTGAGGCAG TCGCGAAAAA AGTCGCACGG GACAACTTCC TGGCGATCTT GCCGCGAACA
GCGCTCAAGT CCGGTCAACC TGCGCTGAAT CGTTAA
|
|---|
| Protein sequence | MPVCRRTLVS VFRLSLAVLM VFTGAASARE YTYSDAHLHY VDFFQETAGM PKLLTAMKEN
SIEHVMISGI PVAKKWHEDE PKRPRYYAGD DADAYWYSAT DVIVADAVQK LTPEQRQSFH
PFLSGFNPND KNSAAHIQRM LDLYPGLWQG IGEVFTRHDD LTALTSGDTP RANNEAMTRI
YHLAAENDLP VMLHSNITSK REKNPLYLKE IEEPLRNHPH TRFIWAHAGT SAEIHRHQTQ
LDFLLPTLTR MLEAYPNLFI DLSWSLLTPY LLDEKGQPRA EWVQLVERYP DRFMIGSDVV
GRFNKLGKEI HSFKPFLDAL PEAVAKKVAR DNFLAILPRT ALKSGQPALN R
|
|---|
| |