6 homologs were found in PanDaTox collection
for query gene Pfl01_1484 on replicon NC_007492
Organism: Pseudomonas fluorescens Pf0-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007492  Pfl01_1484  hypothetical protein  100 
 
 
136 aa  268  1e-71  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0157117  normal  0.426246 
 
 
-
 
NC_004578  PSPTO_1807  hypothetical protein  59.5 
 
 
125 aa  137  3.9999999999999997e-32  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1832  hypothetical protein  43.93 
 
 
123 aa  84.7  3e-16  Pseudomonas mendocina ymp  Bacteria  normal  0.999252  normal  0.484481 
 
 
-
 
NC_009656  PSPA7_1923  hypothetical protein  39.6 
 
 
125 aa  64.3  0.0000000005  Pseudomonas aeruginosa PA7  Bacteria  normal  0.544041  n/a   
 
 
-
 
NC_008463  PA14_22770  hypothetical protein  43.62 
 
 
122 aa  56.6  0.0000001  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.067029 
 
 
-
 
NC_008228  Patl_3852  SH3, type 3  34.02 
 
 
199 aa  43.5  0.001  Pseudoalteromonas atlantica T6c  Bacteria  decreased coverage  0.000664747  n/a   
 
 
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