Gene PSPTO_1807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1807 
Symbol 
ID1183448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1977856 
End bp1978233 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content60% 
IMG OID637393183 
Producthypothetical protein 
Protein accessionNP_791632 
Protein GI28869013 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACGG GTGTGCCGGC AAACGCCGAG ACGGTTAATG AAACCGGTGC AGTTCAGCCT 
TTGCACCTGC CTACCCCCGC CAACCAGATT GCCGACCTGC AGTTGCGCCT CAAAGACAGC
GAGCGTCAGC GCGACGAGCT GACACAACAG TTGCAGAACG CCAACCCGGA GCGCGACACC
GCGCTGTTGA CGCGCTTGCG CCAAGAGAAC CAAAAGCTCA AGTTGCAGCT CAAAGAAGCA
TTGTCGGCCG CACCTGCGCG CGTGCTGACC GAGCAACAAC AATGGTTCGT CGCGGGCGGT
GGCGTTGCGA TGTTCGCCCT TCTCTGCGGT ATATTGATCA GCGGTTGGCG TAGGCAACGT
CGGCAGTGGC TAAATTGA
 
Protein sequence
MATGVPANAE TVNETGAVQP LHLPTPANQI ADLQLRLKDS ERQRDELTQQ LQNANPERDT 
ALLTRLRQEN QKLKLQLKEA LSAAPARVLT EQQQWFVAGG GVAMFALLCG ILISGWRRQR
RQWLN