5 homologs were found in PanDaTox collection
for query gene Pfl01_1173 on replicon NC_007492
Organism: Pseudomonas fluorescens Pf0-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007492  Pfl01_1173  bacteriophage signal peptide protein  100 
 
 
171 aa  334  2.9999999999999997e-91  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.347061 
 
 
-
 
NC_010322  PputGB1_1220  phage protein, putative  50.82 
 
 
184 aa  135  3.0000000000000003e-31  Pseudomonas putida GB-1  Bacteria  normal  0.0370127  hitchhiker  0.0000602761 
 
 
-
 
NC_010501  PputW619_4032  phage protein  53.64 
 
 
158 aa  123  1e-27  Pseudomonas putida W619  Bacteria  normal  0.188318  unclonable  0.0000000000000276525 
 
 
-
 
NC_007005  Psyr_4582  hypothetical protein  52.38 
 
 
165 aa  121  5e-27  Pseudomonas syringae pv. syringae B728a  Bacteria  hitchhiker  0.000093288  normal 
 
 
-
 
NC_010322  PputGB1_1744  lysis protein  32.8 
 
 
149 aa  51.6  0.000005  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.000000000121347 
 
 
-
 
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