Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1173 |
Symbol | |
ID | 3716885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1345104 |
End bp | 1345619 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | bacteriophage signal peptide protein |
Protein accession | YP_346905 |
Protein GI | 77457400 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 59 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.347061 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | CTGAGCGTCT GGCGGCTGAT CGGTCTGATG CTGCTGGCCG CAGGTTCGGC GGCGCTGGCC TGGCAGGTTC AGGACTGGCG CTACGAAGGG CATCTGGCGG AGCAGGCCCG GCTTCACGCC GAAACCCTCA ATCAACTGAC TTCGGCCGCC GCCACCGCGC AACAGGCCGA GCAGGACAAG CGTCTGGCCC TGGAGCAACG ACTCACGGCC AGTGAACAAA CCCATTACCG AGCACTGAAC GATGCCCAAC GTGATCAGGA TCGCTTGCGT GATCGTCTTG CCACTGCTGA TCTGCGCCTG TCAGTCCTCA TCGACGCAGG CGACGCTGCC CAAGGCTGCG GTGTGCCAGC CACCTCCGGC GCCGGCGGCG TGGATCATGC AGCCGTACGC GCCCGACTTG ACCCGGCGCA TGCTCGACGA ATTGTCGCCA TCACCGGCGA AGGCGACCGC GGACTGATTG CCTTGCAGGC TTGTCAGGCC TATATCAGAG CGCTGGCGCC CGCACATTTT GAATAA
|
Protein sequence | MSVWRLIGLM LLAAGSAALA WQVQDWRYEG HLAEQARLHA ETLNQLTSAA ATAQQAEQDK RLALEQRLTA SEQTHYRALN DAQRDQDRLR DRLATADLRL SVLIDAGDAA QGCGVPATSG AGGVDHAAVR ARLDPAHARR IVAITGEGDR GLIALQACQA YIRALAPAHF E
|
| |