Gene Pfl01_1173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1173 
Symbol 
ID3716885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1345104 
End bp1345619 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content64% 
IMG OID 
Productbacteriophage signal peptide protein 
Protein accessionYP_346905 
Protein GI77457400 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.347061 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CTGAGCGTCT GGCGGCTGAT CGGTCTGATG CTGCTGGCCG CAGGTTCGGC GGCGCTGGCC 
TGGCAGGTTC AGGACTGGCG CTACGAAGGG CATCTGGCGG AGCAGGCCCG GCTTCACGCC
GAAACCCTCA ATCAACTGAC TTCGGCCGCC GCCACCGCGC AACAGGCCGA GCAGGACAAG
CGTCTGGCCC TGGAGCAACG ACTCACGGCC AGTGAACAAA CCCATTACCG AGCACTGAAC
GATGCCCAAC GTGATCAGGA TCGCTTGCGT GATCGTCTTG CCACTGCTGA TCTGCGCCTG
TCAGTCCTCA TCGACGCAGG CGACGCTGCC CAAGGCTGCG GTGTGCCAGC CACCTCCGGC
GCCGGCGGCG TGGATCATGC AGCCGTACGC GCCCGACTTG ACCCGGCGCA TGCTCGACGA
ATTGTCGCCA TCACCGGCGA AGGCGACCGC GGACTGATTG CCTTGCAGGC TTGTCAGGCC
TATATCAGAG CGCTGGCGCC CGCACATTTT GAATAA
 
Protein sequence
MSVWRLIGLM LLAAGSAALA WQVQDWRYEG HLAEQARLHA ETLNQLTSAA ATAQQAEQDK 
RLALEQRLTA SEQTHYRALN DAQRDQDRLR DRLATADLRL SVLIDAGDAA QGCGVPATSG
AGGVDHAAVR ARLDPAHARR IVAITGEGDR GLIALQACQA YIRALAPAHF E