Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1148 |
Symbol | |
ID | 3716741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1324296 |
End bp | 1326776 |
Gene Length | 2481 bp |
Protein Length | 826 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | Phage tail tape measure protein TP901, core region |
Protein accession | YP_346880 |
Protein GI | 77457375 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGACA CATCGTTTTC GCTGATGTAC GCCGCGCAAA CCGCAGGCGC GGGTTCCGGT TTGTCGGCAG CGGGATCGGC CACGGACAGC CTGATCAAAC CACTGTCCGA ACTGAAAGAG GCGCTGCTCA CGGCCAGTGT CGACATCCGC AGTCTGGTGC GTGAACAGAT CAAGCTCGGC GCCGTTGTCC TGGGGCTGAA CACAGCTCTG GCATCGTTCA AGGTGCCGGT TGTAACTGCC GCACCGGCGG CAGGCGGCGA GAGCAAGTCT AAGCTCAAGG CTGAGATTGA ACAGCGCTCG CCTCCGGCCT ACCTGCAATC GGACATGGCC CTGAAAGCCG CCATGGCCCA GCTCAGGCAG GTTCAAGGCC TGAGTGGCGA CCTCGACACG CTGTCGAAAG CCAACCTCAA ACTGGCCACC GATAAACGGG TTGCCGGCAG TGGGGCGACG GTCGTGGATC TGGTGCAGGT CGAAGTCGCG GCTGGCAGAT CCGGGATTGG CGCTGGTCTC AAGGGCGCCG ACAAGGAGCA AGTGCTGCTG GACTTTGCCC GGGATGCGGC GGTCAATGCG TCGGCGTTCG GCATCAGCCT GAAGTCGGCC GGTGAAATGC TGTCGGCCTG GCAAATCTCG ATGAAACTGG ATCGCACTCA AGGTCAACTG TTGGCCGATG CGACTCAGCA TCTGGGCAAC AGCGGACTGA ATGCGACGGC TGCCGACATC GGTTCGGTCG TGCAGCAATC CGGCGAGTCG GGCGTTGCGG CCGGCATCCT TCCCGAGCAG TTGGCGGCGT TGTCCGCCGC ATTGTTCAAC GCTGATGTCG ACAAGGCCGG TGCCGGGGCG GCGGTGAAAA GCATCAGCGC AGCCCTGGCC AAAGGCACCC AAGGCTCGGC GGCCGAGCAG TCGGCGTGGA AGGCGTTGGG GCTTGATCCC GGCAAGTTGA CCGAAAACGT ACCGGACAGC CTTGTCAAAG CGTTGGCGGC ATTGAAGCAA CAACCGGCAG AGCAGCAAAC GGCGCTGATC AAGACACTTT TCAGTGGCGA CGATGGTGTA CGCAAACTGC TGGCGAAACC CGAAGACCTG CAAAAAGCGT TTTCGCTGGT CGCGCCGGCC AAACTGGAAG GAACGTCGAC GCTGGTGTCC TCGCAAGCGG CCCAGAGCAG ACTGGCATCG TCATTTGCGG GTGAGGGAGG CGTGGGTCAA TGGATGGGCA AACCCGGCGA GGCACAGACG CCGCTTTCAT TGCTCAAGCC CAATGATCCA CTGACACCGG CTTACAGCGG CGCGATTGAA CGCAGCGCCG AGCCTGCGGG CAAAGACCCG CAGCGAAGCT GGAACGCGTT CGATGCCAGT CTCAATCGTC TGATCACGGC GTTGGCGCCG GATGCGACCG GCACGTTGGA CTCGCTGACG AATATGACCA ATGGCGTGGC CGATATGGCC GAAGCCTATC CAAAAACCTC GACGGCGCTG GCCGTTGCGG GCGCTGGACT GTCGGCCATC GTGGTGGCGG TGATGGGCAA GGCGTTCGGC AATTTCACCG ACAAACTGCT CAAGGGCGTC GCTTCAAAAT TGCCGTTCGG TCTTGGCGGT TTGATTGCCG ATCTTGAAGA CCCCAAAGCA AAGGACAAGT CTGCCAGGAA TGGCGCGGAT CATGACTGCT GCTGCAAACC GTTGGGCAGC GGGAGCGGGA CGGCTAACAC ACTCGAGCCA CGCTGGCCAG GCATCCGGCG GCGAGCCGGA CGTGAGCCCA CCGGCCGAAG CGTGCGAAGT CTACGCAGGG TGACGCCTTG GCCACCACGG ACCAGCGCAC CACCAGCGGT GCTGGCACGG CCCGTTCTGC CTTCCATGTC CGGCTCACCC TGGCCGGGAA GCATGACGGC ATTTTCCGGC TCGTCGGCCG TCAGTGCTGC ACCGGCCGCT CCGCTGTCCG GTGCTTACGC TAGGGCAGGC AAGTTGCTCG CCAAGCGAGC GCCGCCGCTG CGATTGCTCA GCGCCGGGTA TGAAATGGTG ACCGGCGTCA TGAAGGGCGA TACGCGTTCC GTCGTGTCGT CCGGTGCATC GTTAGCCGGG TCGTCTGCCG GAGCCGCTGT CGGTGCTGCA CTGGGCACGT TGATTCTGCC GGGTTTGGGC ACCATGGTCG GCGGGTGGCT CGGAAGCATG GCGGGGGGAG CCATCGGTGA GTCCCTGGGC GACAAGCTCG GGACACAAGT CGATCGTCTT GGCTCTCCTG CACAGGTCAG TAAAGATCTG ATCGCGACCT CGGCGACCTT CACGATTCCC GCGACACCTG CCACCGCAAC TGCCAGCCAG CCTGTCACGT TCAACTCCAC CATTAACATC AATGGTCAGG ATCAGGGCAG CGCCCAGGCA CTGGCCAATC TGGTGGTGCA GACAACGATG AGTCAATTGG GCCAGATCAT GCCGACCAAC CCCCTCGCCA CACGACGTGA CGCAGCCCTG ACCGATGGAG TCGCCACATG A
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Protein sequence | MADTSFSLMY AAQTAGAGSG LSAAGSATDS LIKPLSELKE ALLTASVDIR SLVREQIKLG AVVLGLNTAL ASFKVPVVTA APAAGGESKS KLKAEIEQRS PPAYLQSDMA LKAAMAQLRQ VQGLSGDLDT LSKANLKLAT DKRVAGSGAT VVDLVQVEVA AGRSGIGAGL KGADKEQVLL DFARDAAVNA SAFGISLKSA GEMLSAWQIS MKLDRTQGQL LADATQHLGN SGLNATAADI GSVVQQSGES GVAAGILPEQ LAALSAALFN ADVDKAGAGA AVKSISAALA KGTQGSAAEQ SAWKALGLDP GKLTENVPDS LVKALAALKQ QPAEQQTALI KTLFSGDDGV RKLLAKPEDL QKAFSLVAPA KLEGTSTLVS SQAAQSRLAS SFAGEGGVGQ WMGKPGEAQT PLSLLKPNDP LTPAYSGAIE RSAEPAGKDP QRSWNAFDAS LNRLITALAP DATGTLDSLT NMTNGVADMA EAYPKTSTAL AVAGAGLSAI VVAVMGKAFG NFTDKLLKGV ASKLPFGLGG LIADLEDPKA KDKSARNGAD HDCCCKPLGS GSGTANTLEP RWPGIRRRAG REPTGRSVRS LRRVTPWPPR TSAPPAVLAR PVLPSMSGSP WPGSMTAFSG SSAVSAAPAA PLSGAYARAG KLLAKRAPPL RLLSAGYEMV TGVMKGDTRS VVSSGASLAG SSAGAAVGAA LGTLILPGLG TMVGGWLGSM AGGAIGESLG DKLGTQVDRL GSPAQVSKDL IATSATFTIP ATPATATASQ PVTFNSTINI NGQDQGSAQA LANLVVQTTM SQLGQIMPTN PLATRRDAAL TDGVAT
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