12 homologs were found in PanDaTox collection
for query gene Pfl01_1148 on replicon NC_007492
Organism: Pseudomonas fluorescens Pf0-1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007492  Pfl01_1148  Phage tail tape measure protein TP901, core region  100 
 
 		 826 aa  1618    Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011769  DvMF_1298  phage tail tape measure protein, TP901 family  31.48 
 
 		 781 aa  94.7  6e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    hitchhiker  0.0000000000950685 
 
 
-
 
NC_011205  SeD_A2256  tail protein  28.16 
 
 		 642 aa  80.9  0.00000000000009  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  hitchhiker  0.000173389 
 
 
-
 
NC_010717  PXO_01340  phage-related tail protein  27.27 
 
 		 956 aa  76.3  0.000000000002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.776722  n/a   
 
 
-
 
NC_011094  SeSA_A4475  tail protein  27.08 
 
 		 641 aa  75.9  0.000000000003  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  hitchhiker  0.00323148 
 
 
-
 
NC_002947  PP_3865  phage tail protein, putative  24.5 
 
 		 651 aa  73.2  0.00000000002  Pseudomonas putida KT2440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011094  SeSA_A2253  tail protein  27.08 
 
 		 642 aa  72.8  0.00000000003  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.725805  normal  0.182579 
 
 
-
 
NC_009667  Oant_2292  TP901 family phage tail tape measure protein  24.81 
 
 		 793 aa  62.8  0.00000002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0268728  n/a   
 
 
-
 
NC_009783  VIBHAR_01999  hypothetical protein  23.32 
 
 		 997 aa  58.2  0.0000006  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_0580  tail tape measure protein  29.48 
 
 		 714 aa  57.8  0.0000007  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.834112  n/a   
 
 
-
 
NC_007005  Psyr_4592  Phage tail tape measure protein TP901, core region  29.1 
 
 		 719 aa  55.8  0.000003  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012039  Cla_0855  hypothetical protein  55.56 
 
 		 1829 aa  47.8  0.0008  Campylobacter lari RM2100  Bacteria  normal  0.890164  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>