| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0692 |
|---|
| Symbol | |
|---|
| ID | 3714451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 818335 |
|---|
| End bp | 819603 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_346425 |
|---|
| Protein GI | 77456920 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACGCG ACAAATCCAC AGGGCGCCCG ACGCTGGGTT CGGTCATCGG CCGTGGCAAC
CTGATTGTGG CGCTGGTCGC CGTGGCAATG GCCAGTGTGT CGCTGACGCT GCTTGGGGTA
CTGGCGCTGC GGGTCTATGC CGATCACAAC CTGCACTTGA TCGCCCGCTC GATCAGTTAC
ACGGTTGAAG CTGCCGTGGT GTTCAACGAC AAGGCCGCTG CGACCGAAGC GCTGGCGCTG
ATCGCCTCGA CCGAAGAAGT GGCCGATGCC CAGGTGCTGG ACACTCAGGG CCAGTTGCTC
GCGCGCTGGC AGCGTCCGGA GAACGGTCTG TTTTCCGAGC TGGAGATGCA AGTCGCGCGG
GTCATACTGG AAAAACCCAT CAACCTGCCG ATCCTCCATC AGGATCGCGA GATCGGGCGT
ATCTTGCTGA TCGGCCACGG TGGCAGCCTG ATGCGCTTTC TGTTGAGCGG TCTGGCGGGG
ATCATTCTCT GCACGGCGAT CAGCGCTTGG GTCGCGCTGT ACCTGGCGCA GCGTCAGTTG
CGCAGGATCA TCGGTCCGTT GCACAGCCTC GCAGCGGTGG CGCATGCGGC CCGCAGCGAG
CGGGCACTGG ATCGACGGGT GCCACGGGCG AAGATTGCCG AACTGGACAA CCTCGGCAAT
GACTTCAATG CCTTGCTCGA TGAACTCGAA GACTGGCAAA CCCACCTGCA AAGCGAGAAC
GAAACCCTCG CCCACCAGGC CAGCCACGAC AGTCTCACCG GCTTGCCGAA CCGGGCCTTT
TTCGAAGGCC GCCTGATCCG TGCGCTACGC AGCGCCCACA AACTCAACGA GCGCGTGGCG
GTGCTGTTTC TCGACAGCGA CCGCTTCAAG GACATCAACG ACAACTTCGG TCATGCCGCC
GGTGACGCGG TGCTGGTGGC GGTGGCGAAT CGAGTGCGGG CGCAGTTGCG TGAAGAGGAT
CTGGTGGCGC GTCTGGGCGG TGACGAGTTC GCCGTTCTGC TCACGCCCTT GCACAAGACC
GAAGACGCCG AACGCATTGC CGACAAGATC CTCGCCAGCA TGGACACCCC GATTGCGCTG
CCGGGCGACA GCAGTGTCGT GACGTCGCTC AGTATCGGCA TCGCGGTTTA CCCCGATCAT
GGCGTCACGC CCGGCACCTT GCTTGATGCG GCCGATGCCG CGATGTATCA AGCCAAGCGT
TTGTCGCGTG GCGCCCAATC CACGGCCGGG TCGGAGCACC CGGTCGATCC CGTTCAAACC
AGGAGCTGA
|
|---|
| Protein sequence | MRRDKSTGRP TLGSVIGRGN LIVALVAVAM ASVSLTLLGV LALRVYADHN LHLIARSISY
TVEAAVVFND KAAATEALAL IASTEEVADA QVLDTQGQLL ARWQRPENGL FSELEMQVAR
VILEKPINLP ILHQDREIGR ILLIGHGGSL MRFLLSGLAG IILCTAISAW VALYLAQRQL
RRIIGPLHSL AAVAHAARSE RALDRRVPRA KIAELDNLGN DFNALLDELE DWQTHLQSEN
ETLAHQASHD SLTGLPNRAF FEGRLIRALR SAHKLNERVA VLFLDSDRFK DINDNFGHAA
GDAVLVAVAN RVRAQLREED LVARLGGDEF AVLLTPLHKT EDAERIADKI LASMDTPIAL
PGDSSVVTSL SIGIAVYPDH GVTPGTLLDA ADAAMYQAKR LSRGAQSTAG SEHPVDPVQT
RS
|
|---|
| |