Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0393 |
Symbol | |
ID | 3712479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 445947 |
End bp | 446801 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | Poly(3-hydroxyalkanoate) depolymerase |
Protein accession | YP_346126 |
Protein GI | 77456621 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.208502 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCACC CGTTCATCTT TCGAACTGTC GAGCTGGATG GCCAGACCAT CCGCACGGCG GTCCGCCCCG GCAAGCCTCA CTTGACGCCC TTGCTGATAT TCAACGGCAT CGGCGCCAAC CTGGAGCTGG TGTTTCCTTT TGTCGCGGCG CTGGATCCGG ATCTGGAAGT GATCGCCTTC GACGTGCCCG GTGTCGGCGG TTCCTCGACG CCGAGCCGGC CGTATCGCTT TCCGGGGCTG GCGAAGCTCA CCGCGCGGAT GCTCGATTAC CTCGACTACG GACAGGTCAA CGTGATCGGC GTGTCCTGGG GTGGCGCGCT GGCGCAACAG TTCGCCTACG ACTATCCCGA GCGCTGCAAG AAGCTGGTGC TGGCGGCGAC CGCTGCCGGT GCGGTGATGG TGCCTGGCAA GCCGAAAGTG CTGTGGATGA TGGCCAGCCC ACGGCGCTAC ATCCAGCCGT CACATGTGAT CCGCATTGCC CCGATGATCT ACGGCGGCTC GTTCCGCCGC GACCCGACAC TCGCCGCCAG CCATGCGGCC AAGGTGCGCT CGGCGGGCAA GCTCGGTTAC TACTGGCAAC TGTTCGCGGG CCTGGGCTGG ACCAGCATTC ACTGGCTGCA CAAGATCCAC CAGCCGACCC TGGTGCTGGC CGGTGATGAC GATCCGCTGA TCCCGCTGAT CAACATGCGC ATGCTCGCCT GGCGAATCCC CAACGCGCAG CTGCACATCA TCGACGACGG GCATCTGTTC CTGATTACCA GGGCCGAGGC GGTGGCGCCG ATCATCATGA AATTCCTCCA GGAGGAACGT CAGCGTGCGG TGATGCATCC GCACCCGACA CCGCTGGGCG GATAA
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Protein sequence | MPHPFIFRTV ELDGQTIRTA VRPGKPHLTP LLIFNGIGAN LELVFPFVAA LDPDLEVIAF DVPGVGGSST PSRPYRFPGL AKLTARMLDY LDYGQVNVIG VSWGGALAQQ FAYDYPERCK KLVLAATAAG AVMVPGKPKV LWMMASPRRY IQPSHVIRIA PMIYGGSFRR DPTLAASHAA KVRSAGKLGY YWQLFAGLGW TSIHWLHKIH QPTLVLAGDD DPLIPLINMR MLAWRIPNAQ LHIIDDGHLF LITRAEAVAP IIMKFLQEER QRAVMHPHPT PLGG
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