Gene Pfl01_0229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0229 
Symbol 
ID3712082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp268890 
End bp270050 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_345962 
Protein GI77456457 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.745812 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAGA CCCTCGCGGT GGCCAATTAC CGCTCGATCA ATAAATTGGT GATTCCGCTG 
GGCCGTCTGA ACCTGATCAC TGGCCCCAAC GGCAGCGGCA AGTCCAACCT GTACCGGGCG
CTGCGGCTGC TGGCGGAAAC CGCTCAGGGC GGCGTGGTCA ATGCGCTGGC CCGTGAGGGC
GGGCTAGACT CGACGTTCTG GGCCGGGCCG GAAACCATCA GCCGGCGCAT GCGCAACGGT
GAAGTGCCGA TCCAGTCCAC CGTGCGCCAG GGCGTCAAAC GCCTGCGTCT GGGCTTTGCC
GGGGAGGATT TCAGTTATTC GATCGCCCTG GGATTGCCTG AGCCGAGCCT CTCGTACTTT
TCCCTCGACC CGGAAATCAA AAAGGAATGC ATCTGGGCCG GGCCGCTTTA TCGTCCGGCC
AGCCTGCTGG TGGATCGCGA CGGGCCGATG ATCCGTACCC GCGACGGTCG CAGTTGGGAC
GTGCTGGCCC AGCACACGCC GAACTTCGAC AGCCTGTTCG ATCAGGTCGG CAGCCTGCGC
ACCTCGCCGG AAGTGTTCCA GATGCGTGAG TTCATCCGCC GCTGGCGCTT CTACGACCAC
TTTCGCAGCG ACGCCGACGC CCCGGTGCGC CAGCCGCAAC TGGGCACGCG CACGCCGGTG
CTGCATCACG ACGGGCGCGA TCTGGCGGCG GCGTTGCAGA CCATCCGCGA GATCGGCGAT
CCCGAGGCGC TGCAGGCGGC GATCAGTGAT GCGTTTCCCG GTGCACGCCT GAACATTGCG
CCGCTGGCGG GCGGACGCTT CGCCATCGAG TTCTTTCAGG AAGGGTTGTT GCGGCCGTTG
TCGGCGGCGG AACTGTCGGA TGGCACGTTG CGCTATCTGC TGCTGGTCGC CGCGCTCCTG
ACGCCACGCC CGCCATCGCT GATGGTGCTG AACGAGCCGG AAACCAGCCT GCATCCGGAC
CTGCTGCCGG CGCTGGCACG CTTGATCATC CGGGTGTCGG AGCAGTGTCA GGTGTGGGTG
GTGTCCCATG CCCGACGATT GATTTCGGCG TTGCAGGAGG ACCCGGAATG CAATTGCATC
GTGCTGGAAA AAACCCTCGG CCAGACCGGA ATAGTCGGGC AGAGGGTTCT GGATGAGCCG
GCGTGGAATT GGCCTGATTA G
 
Protein sequence
MLKTLAVANY RSINKLVIPL GRLNLITGPN GSGKSNLYRA LRLLAETAQG GVVNALAREG 
GLDSTFWAGP ETISRRMRNG EVPIQSTVRQ GVKRLRLGFA GEDFSYSIAL GLPEPSLSYF
SLDPEIKKEC IWAGPLYRPA SLLVDRDGPM IRTRDGRSWD VLAQHTPNFD SLFDQVGSLR
TSPEVFQMRE FIRRWRFYDH FRSDADAPVR QPQLGTRTPV LHHDGRDLAA ALQTIREIGD
PEALQAAISD AFPGARLNIA PLAGGRFAIE FFQEGLLRPL SAAELSDGTL RYLLLVAALL
TPRPPSLMVL NEPETSLHPD LLPALARLII RVSEQCQVWV VSHARRLISA LQEDPECNCI
VLEKTLGQTG IVGQRVLDEP AWNWPD