Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0229 |
Symbol | |
ID | 3712082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 268890 |
End bp | 270050 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_345962 |
Protein GI | 77456457 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.745812 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCAAGA CCCTCGCGGT GGCCAATTAC CGCTCGATCA ATAAATTGGT GATTCCGCTG GGCCGTCTGA ACCTGATCAC TGGCCCCAAC GGCAGCGGCA AGTCCAACCT GTACCGGGCG CTGCGGCTGC TGGCGGAAAC CGCTCAGGGC GGCGTGGTCA ATGCGCTGGC CCGTGAGGGC GGGCTAGACT CGACGTTCTG GGCCGGGCCG GAAACCATCA GCCGGCGCAT GCGCAACGGT GAAGTGCCGA TCCAGTCCAC CGTGCGCCAG GGCGTCAAAC GCCTGCGTCT GGGCTTTGCC GGGGAGGATT TCAGTTATTC GATCGCCCTG GGATTGCCTG AGCCGAGCCT CTCGTACTTT TCCCTCGACC CGGAAATCAA AAAGGAATGC ATCTGGGCCG GGCCGCTTTA TCGTCCGGCC AGCCTGCTGG TGGATCGCGA CGGGCCGATG ATCCGTACCC GCGACGGTCG CAGTTGGGAC GTGCTGGCCC AGCACACGCC GAACTTCGAC AGCCTGTTCG ATCAGGTCGG CAGCCTGCGC ACCTCGCCGG AAGTGTTCCA GATGCGTGAG TTCATCCGCC GCTGGCGCTT CTACGACCAC TTTCGCAGCG ACGCCGACGC CCCGGTGCGC CAGCCGCAAC TGGGCACGCG CACGCCGGTG CTGCATCACG ACGGGCGCGA TCTGGCGGCG GCGTTGCAGA CCATCCGCGA GATCGGCGAT CCCGAGGCGC TGCAGGCGGC GATCAGTGAT GCGTTTCCCG GTGCACGCCT GAACATTGCG CCGCTGGCGG GCGGACGCTT CGCCATCGAG TTCTTTCAGG AAGGGTTGTT GCGGCCGTTG TCGGCGGCGG AACTGTCGGA TGGCACGTTG CGCTATCTGC TGCTGGTCGC CGCGCTCCTG ACGCCACGCC CGCCATCGCT GATGGTGCTG AACGAGCCGG AAACCAGCCT GCATCCGGAC CTGCTGCCGG CGCTGGCACG CTTGATCATC CGGGTGTCGG AGCAGTGTCA GGTGTGGGTG GTGTCCCATG CCCGACGATT GATTTCGGCG TTGCAGGAGG ACCCGGAATG CAATTGCATC GTGCTGGAAA AAACCCTCGG CCAGACCGGA ATAGTCGGGC AGAGGGTTCT GGATGAGCCG GCGTGGAATT GGCCTGATTA G
|
Protein sequence | MLKTLAVANY RSINKLVIPL GRLNLITGPN GSGKSNLYRA LRLLAETAQG GVVNALAREG GLDSTFWAGP ETISRRMRNG EVPIQSTVRQ GVKRLRLGFA GEDFSYSIAL GLPEPSLSYF SLDPEIKKEC IWAGPLYRPA SLLVDRDGPM IRTRDGRSWD VLAQHTPNFD SLFDQVGSLR TSPEVFQMRE FIRRWRFYDH FRSDADAPVR QPQLGTRTPV LHHDGRDLAA ALQTIREIGD PEALQAAISD AFPGARLNIA PLAGGRFAIE FFQEGLLRPL SAAELSDGTL RYLLLVAALL TPRPPSLMVL NEPETSLHPD LLPALARLII RVSEQCQVWV VSHARRLISA LQEDPECNCI VLEKTLGQTG IVGQRVLDEP AWNWPD
|
| |