Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_4329 |
Symbol | |
ID | 8532772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 4750078 |
End bp | 4752282 |
Gene Length | 2205 bp |
Protein Length | 734 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | TonB-dependent receptor |
Protein accession | YP_003261628 |
Protein GI | 261823522 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.692193 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTGCG TTTTAACGCT CCCCGCCACA ACGCAGGCAG CCGATCCGCA AATCGCAACG GATAATGTTC CTCAAACCGA GGCGACAACC GCCGCCCCCG TCCAACTAAA ACGTGTGAAA GTGAACGCCC AACGTGCACC CATTCAGCCA CCGACCACGC TGGCATCGGT AATCGACGGC AAAACGCTCG AAGAAGAGCG GCTCTACCGC TTTGAGGAGC TGTCACAGCT AGTGACAGGT CTGGATGTCG ATACCGTTGA TGTGATGGAT ACGACCGTGA CCATCCGTGG GATTGGCGAT GGTGGCGAGA GCGGCACCAA TATCGGTATG CCGGGCAGCG TGGGGCTGTT TGTCGATGGC GTATATTTGT CCCGCCCCGG CGTTATCTCT AACGATTTGC TGGATATCGA CAGCACCCGC GTGCTCAAAG GCCCGCAGGG TGCCGCCTAT GGCTTTAATA CTACCGGCGG CGCGATTGAT ATTCGCACCC GCAAACCGAC CTTCACCCCC GAATACTCAC TGGAGCAATC GTTCGGACAA CGCGGCTATC TGCAATCCAA ACTGATGGCA TCCGGGCCAC TCAGCGACCA CTGGGCGGGG CGCATCAATC TGTCACGCAC TGAACGCGGC GGAAACGTCA CGAATATCGA AAACGGCCAT AAACTCGGAG GCAGCACCAA TAACGGCGTG CGCGGCCAGT TGCTGTATCA ACCCAATGAC AGCTTTAGCC TCAGAATCAC CGGCGACTAC AGCGATTCGA CTCAGCGCCC CGTTTCGGTT CTGGTGAGCG CAACCGACGC TTTTCGCACT CGCGCCGAAC AAACGGGCCT TAAGGTCGTC GGCGGTCGTC AAGTCGCCAT GGATGACGAG AACGTCATTC GTGTTGCGCA AGGCGGCGGC TCGGTCGAGG CCAACTGGAA ACTGAAGAGT GGATTTAGCC TGAATTCCCT CTCCTCATTG CGCTATTTCC GCGTCTTGCC CAGTACGGCG GACAACTGGA ACATTCCACT CTATAACGAC AGCGGTGCCG ATGTACGCGA TCGCGTCTGG TCACAAAGCT TTTGGCTGGA TTCGCCCAAA GGCAATAAGG TCGATTACTC ACTCGGCGTC GATTACTGGG GAGAGAACCT CGATACCGAG GTAAACAGTC GCTACTACAA CGACAATCGC GTGCGGACGT GGGTAGGGAA TGGCTATCAG GGTATTAACG TGCAGCGCTT TGGTACGCTA GATGACACCG TTTATTCCGT CTATGGTCGC GGAACCTGGC ACGCTGCCGA TAAGCTGGAT GTCATCGTCG GCCTGCGCCA CACCTACGAG AAAAAAGAGG GAACGTTTGT CCGCAGGAAC CGCGCAACCT TCGATTCTGG CCCACTCTCG CAAACCAACC GCCTGCCTTC AGGCTCTGTC AGCCTGAACT GGTTTGCGGC ACCCAACGTC ACTCCTTACC TCACGCTGGG CTACGGGGAA AAATCCGGCG GCCTGAACGT GTCATCCGGG GCAGCAAGGC AGTTGGGGAT CGACTCGCTG TACGTCGATC CAGAGAAAAC TCGCTCGGCG GAGCTGGGGG TTAAAACCCA CTGGTTACAG CGCAAAGTGG AATGGAATAC CGCGCTGTTC TGGAGCGTCG TCGAAGATTT CCAGAATAAC GCCTATGACG AAGAAACGGA TACCAGCTAC CTGATTAATG CCGGGAAATT CCGCTCACGC GGCGGGGAAT CTCAGCTAAC GCTACGCCCG CTTGATGGCC TGAGCATCAG TCTGGCCGGT ACGCTGCTGG ATGCCAGTTA TCTGAACTTC CCTAACGCCC GCTGCCCGGC AGAAATTTCC GCCGTCTCGT GCGATATGTC AGGAAAGCGC GTCTTCAAAT CCCCCACGCT GAGCTACAAC ACGCGCGTGC GTTATCAGTG GGATACGCCA AACAATCTGC AAGCTTCGGT TTCCGGGCAA TGGTCATGGC GGAGCTGGGC TTACGGTACG CTCGATGATT CCGAGAGCAA CCGTATTCCG GCCTACGGCG TCCTGAACCT GTCTAGCGGG CTGAGCGGCA AGCAAGGTGA CAACCGCTGG AACGTGTCGC TGTGGGTGAA AAACGCGCTG GATAAGAACT ACTACCGCTC CGTCAGAGGC TCCAGCGCCA CGACAGGCGT GATTGGCGAA CCGCGCATGG TCGGGATATC GGTCGGGTAC GACTTCAAGG GGTAA
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Protein sequence | MSCVLTLPAT TQAADPQIAT DNVPQTEATT AAPVQLKRVK VNAQRAPIQP PTTLASVIDG KTLEEERLYR FEELSQLVTG LDVDTVDVMD TTVTIRGIGD GGESGTNIGM PGSVGLFVDG VYLSRPGVIS NDLLDIDSTR VLKGPQGAAY GFNTTGGAID IRTRKPTFTP EYSLEQSFGQ RGYLQSKLMA SGPLSDHWAG RINLSRTERG GNVTNIENGH KLGGSTNNGV RGQLLYQPND SFSLRITGDY SDSTQRPVSV LVSATDAFRT RAEQTGLKVV GGRQVAMDDE NVIRVAQGGG SVEANWKLKS GFSLNSLSSL RYFRVLPSTA DNWNIPLYND SGADVRDRVW SQSFWLDSPK GNKVDYSLGV DYWGENLDTE VNSRYYNDNR VRTWVGNGYQ GINVQRFGTL DDTVYSVYGR GTWHAADKLD VIVGLRHTYE KKEGTFVRRN RATFDSGPLS QTNRLPSGSV SLNWFAAPNV TPYLTLGYGE KSGGLNVSSG AARQLGIDSL YVDPEKTRSA ELGVKTHWLQ RKVEWNTALF WSVVEDFQNN AYDEETDTSY LINAGKFRSR GGESQLTLRP LDGLSISLAG TLLDASYLNF PNARCPAEIS AVSCDMSGKR VFKSPTLSYN TRVRYQWDTP NNLQASVSGQ WSWRSWAYGT LDDSESNRIP AYGVLNLSSG LSGKQGDNRW NVSLWVKNAL DKNYYRSVRG SSATTGVIGE PRMVGISVGY DFKG
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