Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2611 |
Symbol | pspF |
ID | 8531012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 2851684 |
End bp | 2852670 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | phage shock protein operon transcriptional activator |
Protein accession | YP_003259974 |
Protein GI | 261821868 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0890796 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTCAGG AAAAAGAGAA CCTGCTGGGC GAAGCCAACA GCTTTTTAGA GGTGCTGGAA CAGGTGTCGC AGTTGGCACA GTTAAATAAG CCGGTGCTGG TGATCGGCGA GCGCGGTACA GGCAAGGAGT TGATTGCCAG CCGCTTGCAC TACCTTTCCC CACGCTGGCA AGGGCCGTTC GTTTCCCTGA ACTGCGCGGC GCTCAACGAA AATCTGCTCG ATTCCGAGTT ATTTGGTCAT GAAGCGGGTG CCTTTACCGG GGCACAGAAG CGCCATCTGG GACGCTTCGA GCGCGCCGAC GGCGGAACAC TGTTTTTAGA TGAACTCGCC ACCGCGCCGA TGCTAGTGCA GGAAAAACTA CTGCGTGTGA TCGAATACGG CATGCTGGAA CGCGTCGGCG GCAGAGATCA GCTTCAGGTT GACGTGCGTC TGGTGTGCGC CACCAATGAC GACCTGCCTG CGCTGGCTGC CTGCGGTAAG TTCCGCGCAG ACCTGCTCGA TCGTCTGGCC TTCGACGTCG TGCAACTTCC GCCGCTGCGC GAACGTCAGC AAGACATTAT GTTATTAGCA GATAATTTTG CGATTCAGAT GTGCCGCGAA TTGCACCTGC CGCTGTTTCC CGGTTTTACC GCTACCGCAC GCGAAACGCT GCTGAATTAC GACTGGCCGG GAAATATTCG TGAACTGAAA AACGTGGTTG AGCGCTCAGT GTATCGTCAC GGCGATAGCG AACAGCCTCT CGATACCATC ATTCTGAACC CCTTCCACCG AACTACCGCC ATTCAGGAAA AACCACAGAC AACATCGGGC CAGCCGGATT TACCGTTAGA CATGAAGCCG TGGCTGCTGG AACAAGAGAA AGGCTTGATC GTTCGGGCGT TAAATCAGGC GAAGTTTAAC CAGCGCAAGG CCGCGGAGCT ACTGGGATTA ACCTATCACC AGTTGCGCGG ATTGCTAAAG AAACACGATA TTGCGGTGAA TGAGTGA
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Protein sequence | MLQEKENLLG EANSFLEVLE QVSQLAQLNK PVLVIGERGT GKELIASRLH YLSPRWQGPF VSLNCAALNE NLLDSELFGH EAGAFTGAQK RHLGRFERAD GGTLFLDELA TAPMLVQEKL LRVIEYGMLE RVGGRDQLQV DVRLVCATND DLPALAACGK FRADLLDRLA FDVVQLPPLR ERQQDIMLLA DNFAIQMCRE LHLPLFPGFT ATARETLLNY DWPGNIRELK NVVERSVYRH GDSEQPLDTI ILNPFHRTTA IQEKPQTTSG QPDLPLDMKP WLLEQEKGLI VRALNQAKFN QRKAAELLGL TYHQLRGLLK KHDIAVNE
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