Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_1933 |
Symbol | |
ID | 8530332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 2098619 |
End bp | 2100130 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003259320 |
Protein GI | 261821214 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0512785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCCTA CCTCCCAAAG CCGACTGGAA ATGCGCAACA TTTCCATCTC CTTTTCTGGT TTCCACGCCC TCAAGCAGGT TAATTTCACT CTGGAAGGGG GCTCGATTCA TGCCCTGACT GGCGCAAACG GTGCGGGTAA ATCCACGCTC ATGACGATCT TATCGGGTGC TTACGATCAC TATCAGGGCG ACATTCTGAT TAATGGCAAG CAGGCCGATG TCCATTCGCC GCGTGATGCC AAGCGATATG GCATCCATCT GGTGCAGCAG GAAGTCGATG TCGCGCTGGT TCCCACGCTG TCCGTGGCGG AAAACATTAT GCTGGACACG CTGGCACAGG ACGGACATCT GCTGAATTGG CCGCAGATAT ATCGTCAGGC GCAGGTGCTG CTCGATCAGC TTGGCGTTCA CCTTAATGTT CGTCAACGGC TGGATACCTG CTCACTGGCT GAGAAACAGC AAATTTTGCT CGCCCGCGCA TTATCCCATG AATGCCGCTT CCTGATTTTA GATGAGCCTA CCGCACCATT AGATCAGGCT GAAAGCGCGC GTCTCTTCCA AGTGGTTCGT CGGTTACAGG CCGGGGGCAT CGGGATCGTG TTTATTTCCC ACCGTATTCA TGAGTTGAGC GAAATTTGCG ATACGTTGAC CGTTCTGCGA GACGGTGAAT TTATCAGCAG CGGCGCGATG CAGGGGCTGA GCGGCGAGGA AATTGTAGAA AGAATGTTGG GGCATCGGCT TGATGATATC TTTCCACCAC GCCGAACCGC ATATTCAGAA GAGACACTGC TTCAGGTCAC CGGTTTGCAC GACGAGACGC TGCTACACAA TATTTCACTC ACGCTGCGCA AAGGGGAGAT TCTGGGCATT GCCGGACTGG CTGGTGCGGG CAAAACCGAG TTGTGTAAAG CGCTGTTCGG CGCAGAACCC TGCCAGATCG CGCAGGCGGA ATATCGCGGT AAACCCTGGA AGCCGCATTC ACCTCATCAG TCCGTCGAGC AAGGCCTGGC GCTGGTTCCT GAAGAGCGGC GCAAGGAAGG TATTTTTATT GATGAATCCG TCACCATGAA TCTCAGCATC ACCGCCACCA ACAGCTTTTC TCGTTGGGGC CTATTCAGCC GAGGCAAAGC GCTGCGCTGG GCGAAACAGA TCGTTGAACA GCTTGCGGTT CGCACCACCG GTCCGGCGCA AAAGCTGGCG CGCCTATCGG GTGGCAACCA GCAAAAAGTC GCCATCGGCA AGTGGCTACG GAGCGAAGCA CAGGTTCTGA TTTTTGATGA ACCCACCAAA GGCGTGGATA TCAAGGCCAA ACAAGATCTG TTCACGCTGA TTGACAACCT AGCCCGTCAG GGCAAAGGCA TTATTTATGC GTCAGGCGAG TTCTCCGAAC TTGTCGGACT CTGCGATCGT GTCTGCGTGC TATGGGATGG CCGAATTGTC GCAGAATTGA ACGCCGCTGA CATTGACGAA GAAACCCTAC TTTTATATTC AACTGGAGGA ACTCCCGCGT GA
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Protein sequence | MIPTSQSRLE MRNISISFSG FHALKQVNFT LEGGSIHALT GANGAGKSTL MTILSGAYDH YQGDILINGK QADVHSPRDA KRYGIHLVQQ EVDVALVPTL SVAENIMLDT LAQDGHLLNW PQIYRQAQVL LDQLGVHLNV RQRLDTCSLA EKQQILLARA LSHECRFLIL DEPTAPLDQA ESARLFQVVR RLQAGGIGIV FISHRIHELS EICDTLTVLR DGEFISSGAM QGLSGEEIVE RMLGHRLDDI FPPRRTAYSE ETLLQVTGLH DETLLHNISL TLRKGEILGI AGLAGAGKTE LCKALFGAEP CQIAQAEYRG KPWKPHSPHQ SVEQGLALVP EERRKEGIFI DESVTMNLSI TATNSFSRWG LFSRGKALRW AKQIVEQLAV RTTGPAQKLA RLSGGNQQKV AIGKWLRSEA QVLIFDEPTK GVDIKAKQDL FTLIDNLARQ GKGIIYASGE FSELVGLCDR VCVLWDGRIV AELNAADIDE ETLLLYSTGG TPA
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