| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1173 |
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| Symbol | |
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| ID | 8529556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 1267894 |
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| End bp | 1269354 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | transcriptional regulator, GntR family with aminotransferase domain protein |
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| Protein accession | YP_003258594 |
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| Protein GI | 261820488 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.914694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCATCA TCGACTCACA AGAAAGTACG CTCTATCAAC AACTCGCGGA AACCTTCGCT
ACGGCCATTC ATCAAGGGAC GTTAGCATCG GGAAGCCGTT TGCCTTCTAT TCGTCGAGTG
GCTGGTTCAC ATCAGGTGAG TGTCAACACC GTGTTGAATG CCTGGCGTAT TCTCGAAGAT
CGCGGGTTGA TCGAAGCTCG ACCGCAGTCT GGTTACTTTG TTCGCGGGCG TCTGCCGTCG
CTAACGGAAA GCAAACCTCA TCGTGCGCAG GTGATTGTGC CGGGCAGTGA AAAGCTGGAT
CTGATTGATA CCGTGTTCGC GGCCCAGACG CACCCCGACT ACACCAATAT TTCTCTGGCG
TGCCCGCAGC ATGCCGATTT CTATCCTACC GAGAAGATCA GCCGTATTGC CGCGTCCTTG
CTGCGGCGAC AGCCTGAATT GATTGGTCGT TATGCGCTAC CGCCGGGCAG TGAGCGGTTG
CGGCGCGAGG TCGCGAGGCG AGCGATGGAT TTGGGGATGA CATTGACCCG CGAGGACATC
ACGATCACCC ACGGTTGCAT GGAAGCGCTC CAGTTGGCGC TGCGCACGGT AACGCAGCCG
GGCGACTGTG TAGGATTGGA AACGCCAACC TATTTTTATC TCTTTCCCCT GCTCGCCAGT
TTGGGATTGA AAACGGTAGA GATTCCGACC GATCCGCAGC GCGGACTCGC GCTGGATGCG
TTGGAGCTGG TGTTATCAGA AAATCGCTTA CAGGCGATTA TCGCCATGCC GAACGCGCAG
AATCCGCTAG GGTGCAGCAT GACGCTGGCG GATAAAAAGC GGCTGGCAAA GTTGGTGAAC
GATTATCAGG TACCGCTCAT TGAGGATGGG CTATACAGTG AACTTCAGTT TAGCTGGCCG
TTGTCGCCGA CGGTGAAAGC CTTCGACCGC GAGGGCTGGG TGATTTACTG CTCCAGCTTC
ACGAAAACGT TAGCGCCCGA TTTTCGTATC GGCTGGATGG CGTCGGGGCG TTTCCGGGCA
AAAGTGGCGC GACTGAAAGC GGTATCGTCG ATGGCGGAAT CGGCGCTGCT ATCAGAAACG
CTGGCGCAGT TTCTGGAGTC CGGCGGTTAC GATCATCATC TGCGCACGTT GCGTCGCCGC
TATGCCGCAC AGATGGATGA GGCGCGTGGG CTGATCGCTC GACATTTCCC GCAGGGTACA
CGGGCAACGC AGCCGCAGGG CGGGTTTGTC TTCTGGCTGG AATTACCAGG CGGAGTGGAT
GGGGTTGAGT TATTCCATCG CCTGCTGCAA GAGAAGATTT GCGTCACGCC CGGTGAGCTC
TACACGTTGA GTGGCCGCTG TAAGCACGCG CTTCGGTTGT CTTGCTGCTA CCCGTTTGAT
GAACGCTACA CGTATGCGCT TAAGCGTGCT GGTGCGCTGG CATGTGAAAT GAGCGGTATC
GGGCCGGGTA GCGCAGAATA G
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| Protein sequence | MSIIDSQEST LYQQLAETFA TAIHQGTLAS GSRLPSIRRV AGSHQVSVNT VLNAWRILED
RGLIEARPQS GYFVRGRLPS LTESKPHRAQ VIVPGSEKLD LIDTVFAAQT HPDYTNISLA
CPQHADFYPT EKISRIAASL LRRQPELIGR YALPPGSERL RREVARRAMD LGMTLTREDI
TITHGCMEAL QLALRTVTQP GDCVGLETPT YFYLFPLLAS LGLKTVEIPT DPQRGLALDA
LELVLSENRL QAIIAMPNAQ NPLGCSMTLA DKKRLAKLVN DYQVPLIEDG LYSELQFSWP
LSPTVKAFDR EGWVIYCSSF TKTLAPDFRI GWMASGRFRA KVARLKAVSS MAESALLSET
LAQFLESGGY DHHLRTLRRR YAAQMDEARG LIARHFPQGT RATQPQGGFV FWLELPGGVD
GVELFHRLLQ EKICVTPGEL YTLSGRCKHA LRLSCCYPFD ERYTYALKRA GALACEMSGI
GPGSAE
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