Gene Pden_5096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_5096 
Symbol 
ID4583657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp608878 
End bp609789 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content70% 
IMG OID639772399 
Productinner-membrane translocator 
Protein accessionYP_918852 
Protein GI119387818 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.681438 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.989251 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCTGG CCGAGCAGGC GCTGAACGGC CTGCAATACG GGATGATGCT GTTTCTGATG 
GCGGCCGGGC TGACGCTGGT CTTTGGCGTC ATGGGGCTGA TCAACCTTGC GCATGGCTCG
CTTTACATGA CCGGGGCATT CGCCTGCGCG GCGGTGGCGG CGGCCACCGG CTCGTTCTGG
CTGGGGCTGG TCGCCAGCCT GGCGGCGGCC GCCGCGGCGG GCGCGCTGGT CGAGATCGCG
GTGATCCGGC GGCTTTACGC CCGCGACCAC CTGGACCAGG TGCTGGCGAC ATTCGCGCTG
ATCCTGGTGT TCTCCGAGGG CACGCGCTGG CTGTTCGGCT CGTTCCCGCT TTACCTCAAG
CTGCCGGCCG CGCTTTCCGG CGCGGTGGTG CTGCCGGGCG GGCTGCATTA CCCGCTGTTC
CGGCTGGTCA TCATCGGCTT TGGCGCGGCG GTGGCCGTGG GGCTGTGGTG GCTCATCACC
CGCACGCGGC TGGGCATCCG CATCCGCGCC GGCGAGGCGG ATCGCGAGAT GATCGGCGCG
CTGGGCGTCG ACATCGCGCG GCTCTACACC ATCGTCTTCG CGCTTGGCGC GGCGCTGGCG
GGGCTTGCCG GGGCGCTGGT CGGCACCATC CAGTCGGTGC AGGTCGGCAT GGGCGAGCCG
GTGCTGATCC TGGCCTTCGT GGTGGTGGTG ATCGGCGGCA TCGGCTCGAT CAAGGGCGCG
CTTGTCGGTG CGCTGCTGGT CGGCATGACC GATACGCTGG GCAAGGCGCT GCTGCCGGGG
CTGCTGTCGC GGGTGTGGGA TGCGTCCAGC GCCAACACCA TCGGCGCCTC GCTGGCCTCG
GTGCTGATCT ATGTGCTGAT GGCCGTGGTG CTGATCCTGC GGCCGCAGGG GTTGTTCGGG
GCAAGGGGCT GA
 
Protein sequence
MLLAEQALNG LQYGMMLFLM AAGLTLVFGV MGLINLAHGS LYMTGAFACA AVAAATGSFW 
LGLVASLAAA AAAGALVEIA VIRRLYARDH LDQVLATFAL ILVFSEGTRW LFGSFPLYLK
LPAALSGAVV LPGGLHYPLF RLVIIGFGAA VAVGLWWLIT RTRLGIRIRA GEADREMIGA
LGVDIARLYT IVFALGAALA GLAGALVGTI QSVQVGMGEP VLILAFVVVV IGGIGSIKGA
LVGALLVGMT DTLGKALLPG LLSRVWDASS ANTIGASLAS VLIYVLMAVV LILRPQGLFG
ARG