Gene Pden_4808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4808 
Symbol 
ID4583370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp304007 
End bp304819 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content68% 
IMG OID639772112 
Productphenylacetate-CoA oxygenase, PaaI subunit 
Protein accessionYP_918565 
Protein GI119387531 
COG category[S] Function unknown 
COG ID[COG3396] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02158] phenylacetate-CoA oxygenase, PaaI subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.364827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.548866 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTCGC TGCCTGACAT GACCACGCCC CAGGTGGCGG AACTGGCCCA GCCCGATGCC 
GGGCAGGAGG CGTTCTTCGA GATGCTGCTG CGCATCGGCG ACTCGGCGCT GGTCCTTGGC
CATCGCGTGT CCGAATGGTG CGGTCATTCG CCGGCGCTGG AAGAGGACAT CGCGCTGGCC
AACGTGGCGC TGGACCTGAT CGGCCAGACG CAGCTTTGGC TGGGCCTGGC CGGCGAGGTC
GAGGGGCAGG GCCGCTCGGC CGACGACCTG GCCTATCTGC GCGACGCCTG GGATTTCCGC
AACCTGCTGA TCTGCGAGCG TCCGAACGGC GATTTCGGCC ATACGCTGAT GCGGCAGTTC
CTGTTCGACG CCTGGCACTA CGAGTTGTTG AAGGGGCTGG CGGCTTCGTC GGACCCGCGC
GTGGCCGAGA TTGCGGCCAA GGCGGGCAAG GAGGTGGCCT ATCACCTGGA GCGCTCGTCC
GACCTGGTGG TGCGGCTGGG CGACGGGACC GAGGAAAGCC ATCGCCGGAT GCAGGAGGCG
CTGGACGCGC TTTGGCCCTA TGCCGGCGAG ATGTTCATCG GCGACGACAA GGACGCCGAG
CTTGCCGCGC GCGGTATCGC CCCCGATCCG GCCAGCCTGC GCGCCGGCTG GGACGCCACG
CTGCGCCATG TGCTGGGCGA GGCGACCTTG CAGATTCCCG ACAGCGACTT TGCGCACAAG
GGCGGTAAGC AGGGCATCCA TACCGAACAC CTGGGCTATA TCCTGGCCGA GATGCAGTTC
CTGCAACGCG CCTATCCCGG CGCAAGCTGG TAA
 
Protein sequence
MPSLPDMTTP QVAELAQPDA GQEAFFEMLL RIGDSALVLG HRVSEWCGHS PALEEDIALA 
NVALDLIGQT QLWLGLAGEV EGQGRSADDL AYLRDAWDFR NLLICERPNG DFGHTLMRQF
LFDAWHYELL KGLAASSDPR VAEIAAKAGK EVAYHLERSS DLVVRLGDGT EESHRRMQEA
LDALWPYAGE MFIGDDKDAE LAARGIAPDP ASLRAGWDAT LRHVLGEATL QIPDSDFAHK
GGKQGIHTEH LGYILAEMQF LQRAYPGASW