Gene Pden_4540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4540 
Symbol 
ID4583097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp20858 
End bp21871 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content64% 
IMG OID639771846 
Producttransposase IS66 
Protein accessionYP_918299 
Protein GI119387265 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGAG AGGTTCACGT ACGGTTCTGG GAGCGCGTGA GGGTGAAATC CCCTCGCGCG 
ACTCGCTTTC CGTTGTATCG TCAGAGCCAG ATCTTCGACC GCGAAGGGCT CGATCTTGAC
CGTTCCACGC TGGCCGACTG GGTTGGCAAG TCCACCGCCC TGCTGGAACC CTTGGCCGAG
GCCATCGGTC GCCATGTCCT GTCGGCCGAG GCGATCTTTG CCGATGACAC GCCTGTCAGT
ATGCTGGCGC CCGGCACCGG CAAGACACAG ACCGCGCGGC TCTGGACCTA CGCCCGCGAC
GAACGCCCCT GGGGTGGCGA TACCCCACCG GCCGCTTGGT ATCGGTTCTC CGGCGACCGG
AAAGGCCAGC ACCCCAAGGA TCACCTCGCC CGATACCGCG GCTGGATGCA TGCCGACGGC
TATGCCGGGT TTGAGGACTT GTATCGCTCC GGTTCAATCC GCGAGGTCGC CTGCATGGCG
CATGTGCGGC GCAAGTTCGT CGACATCCAC CGGTCGCAAG GCTCCCCGAT CGCCGAAGAG
GCCATCGGCC GGATCGCGCA ACTCTACGCC GTCGAGAAAG AGGCCCGAGG TTCGCCACCT
GATCGTCGAG CCGAGCTGCG ACAAGCCCAT TCCGCCCCGA TCTTCGACAA TCTGGAGCGC
TGGCTCGCCC TGCAACTCAC CACGGTCTCA GGCAAATCCC CGCTTGCTTC GGCCATCCGC
TATGCCCTGG CCCGCATGGA ACGCATGCGC CCCTATCTCG ACCACGGCAT CCTCGAACTG
GACAACAACG TCGCCGAACG AGGCGTGCGT GCTGTCGCCC TCGGCCGCAA GAACTACCTC
TTCGTCGGCT CCGAAGCAGG CGGCAAGGCC GCCGCCATCG CCTATACGCT GATCGAAACG
GCCAAGCTCA ACGCCATTGA TCCCCACGCC TGGCTCGCCG ACACCCTGGC CCGCATCCCA
GACTACAAGA TCACAAAGGT CGATGACCTG CTGCCTTGGA AATGGCGCGG GTAG
 
Protein sequence
MNREVHVRFW ERVRVKSPRA TRFPLYRQSQ IFDREGLDLD RSTLADWVGK STALLEPLAE 
AIGRHVLSAE AIFADDTPVS MLAPGTGKTQ TARLWTYARD ERPWGGDTPP AAWYRFSGDR
KGQHPKDHLA RYRGWMHADG YAGFEDLYRS GSIREVACMA HVRRKFVDIH RSQGSPIAEE
AIGRIAQLYA VEKEARGSPP DRRAELRQAH SAPIFDNLER WLALQLTTVS GKSPLASAIR
YALARMERMR PYLDHGILEL DNNVAERGVR AVALGRKNYL FVGSEAGGKA AAIAYTLIET
AKLNAIDPHA WLADTLARIP DYKITKVDDL LPWKWRG