| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4468 |
|---|
| Symbol | pyrE |
|---|
| ID | 4583018 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | + |
|---|
| Start bp | 1682075 |
|---|
| End bp | 1682746 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639771775 |
|---|
| Product | orotate phosphoribosyltransferase |
|---|
| Protein accession | YP_918228 |
|---|
| Protein GI | 119387173 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0461] Orotate phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR00336] orotate phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.950818 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTGC CCTTCCCTCC GCATGAGGAA ATCGCCCGGC TGACCGCCCG CATGCTGCTG
GAGATCAAGG CGGTGCACTT CAACGCGGCC GAGCCCTTTA CCTATGCCTC GGGGCTGAAG
GGACCGACCT ATATCGACTG CCGCAAGCTG ATCAGCTTTC CGCGCATCCG CTCGACGCTG
ATGGATTTCC TGGCGGCGAC CGTGCTGCGC GAAGCGGGCT TTGCCGCCTT CGACAATGTC
GCCGGCGGCG AGACGGCGGG CATCCCCTTC GCCGCCTTCG TGGCCGAGCG GCTGGAACTG
CCGATGACCT ATGTGCGCAA GAAGCCCAAG GGCTACGGCC GCAACGCGCG GATCGAAGGC
GCCATGACCG AGGGCCAGCG GGTGCTGCTG GTCGAGGACC TGACCACCGA CGGCGGCTCG
AAGCTGAGCT TCGTCGATGC GATCCGCGAG ACCGGCGCGA CCTGCGCCGA TACGGCGGTG
ATCTTCTATT ACGGCATCTT CCCCGAAACC ACGCAGCGCC TGGCCGACCA TGGCGTCCGG
CTGCACTATC TCTGCACCTG GTGGGACGTG CTGGCCGAAG CCAAGGCGCA AGGCTTCTAT
GACGAGGCGA CGCTCACCGA AGTCGAAAGC TTCCTGACCG ATCCCCGCGC CTGGCAAGCC
GCGCATCCCT GA
|
|---|
| Protein sequence | MTLPFPPHEE IARLTARMLL EIKAVHFNAA EPFTYASGLK GPTYIDCRKL ISFPRIRSTL
MDFLAATVLR EAGFAAFDNV AGGETAGIPF AAFVAERLEL PMTYVRKKPK GYGRNARIEG
AMTEGQRVLL VEDLTTDGGS KLSFVDAIRE TGATCADTAV IFYYGIFPET TQRLADHGVR
LHYLCTWWDV LAEAKAQGFY DEATLTEVES FLTDPRAWQA AHP
|
|---|
| |