| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4118 |
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| Symbol | |
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| ID | 4582668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 1270064 |
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| End bp | 1271038 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639771425 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_917878 |
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| Protein GI | 119386823 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00686854 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGACA TCCGCCAGCT TCGCTATTTC GTGGCCATCG TCGAACACGG CTCGTTCTCG
CGTGCCGCCG AATTCCTGCA TGTCGCCCAG CCGGCGCTGT CGCTGCATGT GCGCAACATG
GAGGCCGGGC TGGACACGCC GCTGCTGTTT CGCAGCCCGC GCGGGGTCGA GCCGACCGAG
GCGGGGGCGA TCCTGCTGCG CCATGCCCGG ACAATTCTCG ACCAGCTTGC CGTCGCCGAG
GAGGAGATCC GCGGCCATGA GAACGATCCC GCGGGCGAGG TCCGTCTGGG CCTTCCCGGC
ACGATCGGCG AGATCCTGGC CGTGCCGCTG ATCACCGCCG TTCACTTGCG CTACCCCAAG
ATCAAGCTGC GCATCGCCGA GGCGATGAGC GGCTTCGTGC TGGAATGGAT GCGAGAGGGC
CGGATCGACC TTGCCGTGCT CTACGGTCAG GCGGCAGAGC ACGGCATCTC GACCGAGGCC
CTGCTGGAGG AGACGCTGCG GTTCTTCGGC CCTGCCCACC TGGCCGCAAG GGATGACCTG
CCCGCACCCG GCAAGCCCAT CCCCATGGCC GAAGTGACAC GCAAGCCGCT GATCCTGCCC
GGCGAAGGGC ATGGATTGCG GGAATTGCTC AAGCGCCAGG CGCTTTCGGC CGCGCAGGAG
CTGAACACCG TGATGGATGT CGATTCGTAC AGCAACATCA AGCTGCTGGT TGGGGAGGGG
CTGGGGTATT CGGTGCTGCC CGAGAACGCC ATTGCCCCCG AGATCACCGA GGGCCGGTTG
CTGAGCTGGC CCATCGGCGA GCCGGCGATC CGCCGGACCG TGCATCTGGC GCATTCCGCG
GACCGGCCGA TGACGAATGC GGTCACCGTC GTGCGGGCGC TTGCGCGCGA GATCCTGCGC
GACCTGGTCC GCAATCACCG CTGGATCGGT GCCACGGTCC TTGCCGCCGA GGAACCCGCC
AAGCCGCCCC CCTGA
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| Protein sequence | MMDIRQLRYF VAIVEHGSFS RAAEFLHVAQ PALSLHVRNM EAGLDTPLLF RSPRGVEPTE
AGAILLRHAR TILDQLAVAE EEIRGHENDP AGEVRLGLPG TIGEILAVPL ITAVHLRYPK
IKLRIAEAMS GFVLEWMREG RIDLAVLYGQ AAEHGISTEA LLEETLRFFG PAHLAARDDL
PAPGKPIPMA EVTRKPLILP GEGHGLRELL KRQALSAAQE LNTVMDVDSY SNIKLLVGEG
LGYSVLPENA IAPEITEGRL LSWPIGEPAI RRTVHLAHSA DRPMTNAVTV VRALAREILR
DLVRNHRWIG ATVLAAEEPA KPPP
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