| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4028 |
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| Symbol | xseA |
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| ID | 4582579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1175481 |
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| End bp | 1177040 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639771337 |
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| Product | exodeoxyribonuclease VII large subunit |
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| Protein accession | YP_917790 |
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| Protein GI | 119386735 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1570] Exonuclease VII, large subunit |
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| TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.726437 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCTTT TCGAAGACAC GCCCGCCAGC AATGCGCATG AATTCACCGT CTCGGAGATC
TCGGGGGCGG TGAAGCGCGT GCTCGAGGGC GAGTTCGGCC GCGTCCGCGT GCGCGGCGAG
ATCGGCCGTG TCTCGCGCCC CTCGTCCGGG CATCTCTATT TCGATCTCAA GGACGACCGC
GCCGTGATCG CCGCCGTGAC CTGGAAGGGG CAGGCCGCGC GCCTGTCCAC CCGCCCCGAG
GAGGGGATCG AGGTCATCGC CACCGGCCGG CTGACCACGT TCCCCGGCCA GTCGAAATAC
CAGCTGATCG TCGAGGAGAT CGAGCCCGCC GGTGCCGGCG CGCTGATGAT GATGCTGGAG
AAATGCCGCA AGGCGCTGGC GGCCGAAGGG CTGTTCGACG AATCGCGCAA GCGCCCGCTG
CCCTACCTGC CGCGGGTGAT CGGCGTGGTG ACCTCGCCCT CGGGCGCGGT GATCCGCGAC
ATCCTGCACC GGCTGCGCGA CCGTTTTCCG ACGCATGTGC TGATCTGGCC GGTGGCGGTG
CAGGGCGAGG GCTGCGCGTC GCAGGTCACT GCCGCGATCC GGGGCTTCAA CGCGCTGCCT
TCCGACGGGC CGCTGCCCCG CCCGGACCTG ATCATCGTCG CGCGGGGCGG CGGCAGCCTC
GAGGATCTCT GGGGTTTCAA CGAGGAGGCC GTGGTCCGTG CCGCCGCGGA CAGCCTGATC
CCGCTGATCT CGGCCGTGGG GCACGAGACC GACACGACGC TGATCGACTT TGCCTCGGAT
CGCCGCGCGC CCACGCCCAC CGCCGCCGCC GAGATGGCGG TTCCGGTGCG CGCCGAACTC
GCCGCACGCC TGACCGAGAT CCAGGCCCGG ATGATGCGTG CCGCCCAGAC CCGCAACCAG
CGCCAGCGCC AGCGGCTGAG CGATCTGGGC CGCGCGCTTG GCCGGCCGCA GGCGCTGACC
GCCCCGGCGC GGCAGCGGTT CGACCTGTTC GCCGAGCGGC TGGAACCGGC GCTGCGCGGT
TTCGTGCGCG CCCGCCGCGA CCGGCTGAAC GCGCTGCCGC TGTCGCTGTC GGCCTTGCGC
GCCATGCTGC GCAACCGGCG CGATGCACTG CAGGCGCAGG CGCAGCGGTT GCCGCTGTGC
CTCGCGCGGC TGGGCCAGCG CCGGTCCGAG CGGCTGACCG ACCTGGGCAG CCGGCTGGAG
CGCGCCCGGG CGCGGATGCT GGCCGATGCC GCGCGCCAGA TCGTCCGCGA CCGCGGCACG
CTGGACCGGC TGGCGGCAAG GCTTTCCGCC GCGGGGGGGC GCTTGCTGGC ACCACGGCGC
GATGCGCTGG AACGGCTCGA CCGATTGCGC CAGACGCTGG GCTATCGCGA AACCCTGCGT
CGGGGCTTTG CCGTCGTGCA CGGACCTTCG GGCCTGTTGA CCCATGCGGC AGAGGCGGCG
CAGACCCCGC GCTTCGAGAT CGAGTTCCTG GATGGCCGCA TGGCTGCGCG TCCCGACGCG
CCACCGGCCA AGCCCGCCCG CAAGCCGCGC GAGCCCAAGG GCCAGAAATC GCTTTTCTAG
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| Protein sequence | MELFEDTPAS NAHEFTVSEI SGAVKRVLEG EFGRVRVRGE IGRVSRPSSG HLYFDLKDDR
AVIAAVTWKG QAARLSTRPE EGIEVIATGR LTTFPGQSKY QLIVEEIEPA GAGALMMMLE
KCRKALAAEG LFDESRKRPL PYLPRVIGVV TSPSGAVIRD ILHRLRDRFP THVLIWPVAV
QGEGCASQVT AAIRGFNALP SDGPLPRPDL IIVARGGGSL EDLWGFNEEA VVRAAADSLI
PLISAVGHET DTTLIDFASD RRAPTPTAAA EMAVPVRAEL AARLTEIQAR MMRAAQTRNQ
RQRQRLSDLG RALGRPQALT APARQRFDLF AERLEPALRG FVRARRDRLN ALPLSLSALR
AMLRNRRDAL QAQAQRLPLC LARLGQRRSE RLTDLGSRLE RARARMLADA ARQIVRDRGT
LDRLAARLSA AGGRLLAPRR DALERLDRLR QTLGYRETLR RGFAVVHGPS GLLTHAAEAA
QTPRFEIEFL DGRMAARPDA PPAKPARKPR EPKGQKSLF
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