| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3720 |
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| Symbol | |
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| ID | 4582272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 869749 |
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| End bp | 870711 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639771030 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_917483 |
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| Protein GI | 119386428 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.108188 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGGACG CGGTGATCGA CATTCGCGAT CTGGCGGCGT TGATGCCCAT GCATCTCATG
CTGGATCGTG CCGGCGTGAT GGTTTCCCGG GGAAGGACGC TTGCCAAGCT GTTGCGAGGC
GCTGTTCGCC TGGAGGATGT TTTCATTCCA GCCGATAACC TGGGTCATCG GATATCTTTC
AAGGATCTGT TTTCCCATCT GGGCTGCGGC AGGCGGATAT TCTTGCAGAT GCGTCATCAC
GGGGATGTTT CCCTGCGCGG GCATGGCGTC CATGTCTCGC CGGAACGCGC CATGCTCAAC
CTGGGGTTTG GGATATGCCT TTCCTCGGCG GTGCAAAGAT TCGGGCTGAA CGATTCCGAC
TTTCCGCCAT CGGACCTGGC CATGGAGTTC CTGTTTCTGC ACGAGGCGAA CCGTGCCGCG
CTGCTCGAAC TGTCCCGCGT CAACATCGGC CTTGAGGAGG CGCGTGAAAG CGCGCAGGTT
TTGTCGATCA CCGATCCCCT GACCGGATTG CTGAATCGGC GTGGATTCGA CATCGCCTTC
TCCAGGGCAT TCGATCAGAG GGACAAAAGA CCTTTTGCCC TGGTTCATCT GGATCTCGAC
CATTTCAAGA ATATCAACGA CGAATTCGGC CATGCCGCGG GGGATCGCGT CCTGGTCGGG
GTGGCCTCGG CCCTGGCCTC CGAGGTGCGT TCCGGCGACA GGGTTTGCCG CGCGGGAGGC
GACGAGTTCC TGGCGCTGAT CTTTGCCGAC TGGCCGGCGG CGGATTCCCT GAACATCTGC
AAGAGGATCA TCGGCAGGAT CGGTTCCGTC GAGGCCGGTC CCGGCTCGGG CAGGATTTCG
GCAAGCATCG GCATCGCGGT TTCCGACAGC AAGCCAGCCG TGCTGCCCCA TCAGCTGTTC
GAACTCGCGG ATGCAGCGCT TTACCGGGCA AAGATCTCCG GCAGGGGCAG GGTGGCGTTG
TGA
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| Protein sequence | MKDAVIDIRD LAALMPMHLM LDRAGVMVSR GRTLAKLLRG AVRLEDVFIP ADNLGHRISF
KDLFSHLGCG RRIFLQMRHH GDVSLRGHGV HVSPERAMLN LGFGICLSSA VQRFGLNDSD
FPPSDLAMEF LFLHEANRAA LLELSRVNIG LEEARESAQV LSITDPLTGL LNRRGFDIAF
SRAFDQRDKR PFALVHLDLD HFKNINDEFG HAAGDRVLVG VASALASEVR SGDRVCRAGG
DEFLALIFAD WPAADSLNIC KRIIGRIGSV EAGPGSGRIS ASIGIAVSDS KPAVLPHQLF
ELADAALYRA KISGRGRVAL
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