Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3689 |
Symbol | |
ID | 4582241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 838262 |
End bp | 839359 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639770999 |
Product | alanine racemase |
Protein accession | YP_917452 |
Protein GI | 119386397 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0787] Alanine racemase |
TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.376484 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAGCAT CCCCCGCTGC AAATAGCAAA AATGCTAAAA CCCTTGACGC CGCGCATGGC AGGAGCCATG CCGCTGCCAT GGGACTCGTC ATCGATATTC CGGCCATCGT GGCCAACTGG AAGGCGCTTG CGGCCAGGGC CCCGGGCGCG CGGGCGGCTG CGGTCGTCAA GGCCGATGCT TATGGGCTGG GCGCGGATCG CGTCGCGCCG CCGCTTTACG CGGCGGGCGC GCGGGATTTC TTCGTCGCGC TGGCCTCCGA GGGGCGGGCG ATCCGGCCGC TTCTGCCCGA TGATGCGCGC ATCTTCGTGC TGTCCGGCCA TATGGAGGGC GCGGATCTGG CCGGGCTGGT TCCGCTGCTG AACAGTCCCG AGCAGTTCTT CCGCGACCGT GCGCTGCGTC CGCGCGGTCC CTTCGGCATC CAGCTTGACA GCGGCATGAA CCGGCTGGGC ATCGAGCCCG GCGAATGGGC CGCCATCCGG GCCGAGGCGC TGGCCGCGCG CCCGGCGCTG ATCATGTCGC ATCTGGCTTG CGCAGACGAG CCGGACCACC CGGCCAATGC CCAGCAGCTC GCCGCCTTCC GCGCGATGAC CGAGGGCGTG ACCGTGCCGC GTTCGCTGGC GGCCACGGGC GGCATCCTGC TGGGGCCGGA TTACCATTTC GACCTGGTGC GGCCCGGCAT CGGGCTTTAC GGCGGCGAGC CCTTTGCCGA TGCGCGGCCC GTGGTGACGC TGGCGCTGCC GGTGATCCAG GTGCGCGAGG TGAAGCCCGG AGAATCCGTG GGCTACGGCT ATGCCTGGAC CGCCGCGCGC CCGTCGCGCG TGGCGACGGT GGCGGCGGGC TATGCCGACG GGCTGGCACG GGCGCTGGCG CGGGACGGCA AGCTGACGCT TTGGGCCGGC GAGCGCGGGG TGCCGGTGAT CGGCCGCATC TCGATGGACC TGATCACCGT CGACGTGACC GATCTGCCCG ACGTGCCGGC GGCGCTGGAG ATCCTGAACG CGCGGCAGGG CGTCGATGAC CTGGCGGCGC TGTCGGGCAC CATCGGCTAT GAGATCCTGA CCTCGCTGGG GCGGCGCTAC GAGCGGACCT GGCTTTGA
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Protein sequence | MLASPAANSK NAKTLDAAHG RSHAAAMGLV IDIPAIVANW KALAARAPGA RAAAVVKADA YGLGADRVAP PLYAAGARDF FVALASEGRA IRPLLPDDAR IFVLSGHMEG ADLAGLVPLL NSPEQFFRDR ALRPRGPFGI QLDSGMNRLG IEPGEWAAIR AEALAARPAL IMSHLACADE PDHPANAQQL AAFRAMTEGV TVPRSLAATG GILLGPDYHF DLVRPGIGLY GGEPFADARP VVTLALPVIQ VREVKPGESV GYGYAWTAAR PSRVATVAAG YADGLARALA RDGKLTLWAG ERGVPVIGRI SMDLITVDVT DLPDVPAALE ILNARQGVDD LAALSGTIGY EILTSLGRRY ERTWL
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