Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3435 |
Symbol | |
ID | 4581991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 577454 |
End bp | 578089 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639770749 |
Product | GntR family transcriptional regulator |
Protein accession | YP_917202 |
Protein GI | 119386147 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.478263 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGGCCG AGACCCTGTC GCAAACCGCC TATCGCCGCA TCAAGCAGGA TATCCTGGAA GGGCGCATCG CCCCGGATTC GATGCTTTCC GAACGGGAAC TGGCGTTGCG GCTGGGCATC TCGCGGACGC CTCTGCGCTC GGCCCTGTCG CGGCTCGAGA ACGAGAACGT CATCGGCAGG CTTGCGAATG GCGCGCTGAT CGTGCGCTCG GTGACGGTCG AGCAATTGCT GGAAATCGTG CAATTGCGCC AGGTGCTGGA ACGCGCCGCC GCCGCGCGCG CCGCCGAGCG CGGCATCACC GACGAGCTGC GGCAGGTCTG GGACGAGATG CTGCCCTATG CCGAGGGCCG TTCGGTCGGC TTCGACGAGT TCTGGCAGGT CGACGAGCGC TTCCACGCGG CCGTGGCCCG TGCTGCCGGA CTGGAACTGC TGCCCGCCAT CCTGGCCGAG CAGCGCGCCG TCGCCCGGCG CTGCACCATC ACCCGCGTGC ATGACCGTTT CGACGAGCAG GCGCGCGAGC ATATCGCGGT GCTGGAGGCG ATTTCGCGCG GGGACGCCTC GGCTGCGCGC GACGCCATGT CGCTGCATTT CGAAAACGTC CGCAACCGCT TCCTTGGCTG GTTCTCCAAA GGCTGA
|
Protein sequence | MTAETLSQTA YRRIKQDILE GRIAPDSMLS ERELALRLGI SRTPLRSALS RLENENVIGR LANGALIVRS VTVEQLLEIV QLRQVLERAA AARAAERGIT DELRQVWDEM LPYAEGRSVG FDEFWQVDER FHAAVARAAG LELLPAILAE QRAVARRCTI TRVHDRFDEQ AREHIAVLEA ISRGDASAAR DAMSLHFENV RNRFLGWFSK G
|
| |