Gene Pden_3435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3435 
Symbol 
ID4581991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp577454 
End bp578089 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content68% 
IMG OID639770749 
ProductGntR family transcriptional regulator 
Protein accessionYP_917202 
Protein GI119386147 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.478263 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCCG AGACCCTGTC GCAAACCGCC TATCGCCGCA TCAAGCAGGA TATCCTGGAA 
GGGCGCATCG CCCCGGATTC GATGCTTTCC GAACGGGAAC TGGCGTTGCG GCTGGGCATC
TCGCGGACGC CTCTGCGCTC GGCCCTGTCG CGGCTCGAGA ACGAGAACGT CATCGGCAGG
CTTGCGAATG GCGCGCTGAT CGTGCGCTCG GTGACGGTCG AGCAATTGCT GGAAATCGTG
CAATTGCGCC AGGTGCTGGA ACGCGCCGCC GCCGCGCGCG CCGCCGAGCG CGGCATCACC
GACGAGCTGC GGCAGGTCTG GGACGAGATG CTGCCCTATG CCGAGGGCCG TTCGGTCGGC
TTCGACGAGT TCTGGCAGGT CGACGAGCGC TTCCACGCGG CCGTGGCCCG TGCTGCCGGA
CTGGAACTGC TGCCCGCCAT CCTGGCCGAG CAGCGCGCCG TCGCCCGGCG CTGCACCATC
ACCCGCGTGC ATGACCGTTT CGACGAGCAG GCGCGCGAGC ATATCGCGGT GCTGGAGGCG
ATTTCGCGCG GGGACGCCTC GGCTGCGCGC GACGCCATGT CGCTGCATTT CGAAAACGTC
CGCAACCGCT TCCTTGGCTG GTTCTCCAAA GGCTGA
 
Protein sequence
MTAETLSQTA YRRIKQDILE GRIAPDSMLS ERELALRLGI SRTPLRSALS RLENENVIGR 
LANGALIVRS VTVEQLLEIV QLRQVLERAA AARAAERGIT DELRQVWDEM LPYAEGRSVG
FDEFWQVDER FHAAVARAAG LELLPAILAE QRAVARRCTI TRVHDRFDEQ AREHIAVLEA
ISRGDASAAR DAMSLHFENV RNRFLGWFSK G