Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3426 |
Symbol | |
ID | 4581982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 568877 |
End bp | 569647 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639770740 |
Product | LamB/YcsF family protein |
Protein accession | YP_917193 |
Protein GI | 119386138 |
COG category | [R] General function prediction only |
COG ID | [COG1540] Uncharacterized proteins, homologs of lactam utilization protein B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.864417 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGCA CAATCGATCT GAACTGCGAC ATGGGGGAAA GCTTCGGCGC CTATACGATC GGCGACGACG CAGCGATGCT GCAGCTGGTG ACCACGGCGA ACGTCGCCTG CGGCTTTCAC GCCGGCGATC CGGTGGTGAT GCGCCGCACG ATCCGCATGG CACGGGAAAA CGGCGTCTCG GTCGGCGCGC ATCCGTCCTT TGCCGACCTT TACGGATTCG GGCGCCGGCG CATCTCGGGC GAACGTCCCG AGGATCTCGA AACCCAGCTG ATCTACCAGA TCGTCGCCAT GCAGGGCATG TGCGCGCTGG AGGGGCACCC GATGACCCAT GTCAAGACGC ATGGCGCGCT TGGCAACATG GCGGCGGTCG ATCCCGACCT GGCCGCGCTG TGCGTTCGGG CGATTCGCGC CGTGGATCCC GGCCTTACAT TCGTCACCCT GCCCTATTCC GAAACTCATG CGGCCGCCGA AAAGGCCGGG CTGCGCGTGG CCTGCGAAAT CTATGCCGAC CGTTCCTATA CCGACACCGG CGAACTGACG CCGCGCAGCC AGCCCGGTGC CGTCATCCAC GACCCGCGGC AAAGCCTGGA CCAGGTGCTC GAGATGGTGG TGAACGGGCA TATCCCGACC ACCGGCGGCA AGCGGCTGCC GGTCCTGCCC GAGACGCTTT GCGTTCACGG CGACACGCCG GGCGCCGTCG GGATCGTCCG GGCCCTGCGC GCCGCACTGA TCGAAAACGG CATCAAGATC GCGCCTTTCG CCAAGAACTG A
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Protein sequence | MARTIDLNCD MGESFGAYTI GDDAAMLQLV TTANVACGFH AGDPVVMRRT IRMARENGVS VGAHPSFADL YGFGRRRISG ERPEDLETQL IYQIVAMQGM CALEGHPMTH VKTHGALGNM AAVDPDLAAL CVRAIRAVDP GLTFVTLPYS ETHAAAEKAG LRVACEIYAD RSYTDTGELT PRSQPGAVIH DPRQSLDQVL EMVVNGHIPT TGGKRLPVLP ETLCVHGDTP GAVGIVRALR AALIENGIKI APFAKN
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