Gene Pden_3426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3426 
Symbol 
ID4581982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp568877 
End bp569647 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content66% 
IMG OID639770740 
ProductLamB/YcsF family protein 
Protein accessionYP_917193 
Protein GI119386138 
COG category[R] General function prediction only 
COG ID[COG1540] Uncharacterized proteins, homologs of lactam utilization protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.864417 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCA CAATCGATCT GAACTGCGAC ATGGGGGAAA GCTTCGGCGC CTATACGATC 
GGCGACGACG CAGCGATGCT GCAGCTGGTG ACCACGGCGA ACGTCGCCTG CGGCTTTCAC
GCCGGCGATC CGGTGGTGAT GCGCCGCACG ATCCGCATGG CACGGGAAAA CGGCGTCTCG
GTCGGCGCGC ATCCGTCCTT TGCCGACCTT TACGGATTCG GGCGCCGGCG CATCTCGGGC
GAACGTCCCG AGGATCTCGA AACCCAGCTG ATCTACCAGA TCGTCGCCAT GCAGGGCATG
TGCGCGCTGG AGGGGCACCC GATGACCCAT GTCAAGACGC ATGGCGCGCT TGGCAACATG
GCGGCGGTCG ATCCCGACCT GGCCGCGCTG TGCGTTCGGG CGATTCGCGC CGTGGATCCC
GGCCTTACAT TCGTCACCCT GCCCTATTCC GAAACTCATG CGGCCGCCGA AAAGGCCGGG
CTGCGCGTGG CCTGCGAAAT CTATGCCGAC CGTTCCTATA CCGACACCGG CGAACTGACG
CCGCGCAGCC AGCCCGGTGC CGTCATCCAC GACCCGCGGC AAAGCCTGGA CCAGGTGCTC
GAGATGGTGG TGAACGGGCA TATCCCGACC ACCGGCGGCA AGCGGCTGCC GGTCCTGCCC
GAGACGCTTT GCGTTCACGG CGACACGCCG GGCGCCGTCG GGATCGTCCG GGCCCTGCGC
GCCGCACTGA TCGAAAACGG CATCAAGATC GCGCCTTTCG CCAAGAACTG A
 
Protein sequence
MARTIDLNCD MGESFGAYTI GDDAAMLQLV TTANVACGFH AGDPVVMRRT IRMARENGVS 
VGAHPSFADL YGFGRRRISG ERPEDLETQL IYQIVAMQGM CALEGHPMTH VKTHGALGNM
AAVDPDLAAL CVRAIRAVDP GLTFVTLPYS ETHAAAEKAG LRVACEIYAD RSYTDTGELT
PRSQPGAVIH DPRQSLDQVL EMVVNGHIPT TGGKRLPVLP ETLCVHGDTP GAVGIVRALR
AALIENGIKI APFAKN