| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3382 |
|---|
| Symbol | |
|---|
| ID | 4581939 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | - |
|---|
| Start bp | 527269 |
|---|
| End bp | 527922 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639770698 |
|---|
| Product | class II aldolase/adducin family protein |
|---|
| Protein accession | YP_917151 |
|---|
| Protein GI | 119386096 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.610835 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCGA TCCTGTCGGA GGAAACCCGG ATGCGCGATC AGATCGCGGC TGTCGGAAAA
TCCGTTTTCG ACCGTGGGCT GACCGCCGGC TCTACTGGCA ACATCAGCGT CCGCTTGGGC
GATGGCAGGC TGCTGATGAC GCCGACCAAT ACCAGCCTCG GCGTGCTGGA CCCGGCCCGG
CTGTCGCTGC TGGATGCGGA TTGCAACCAT TTGTCAGGCG ACAAGCCGAC AAAGGAAGCC
TTTCTGCACG GCTGCATGTA TTGCCGACGC GCCGGTGCAA ATGCCGTGGT GCACCTGCAT
TCCACCCATG CGGTGGCGGT CAGCATTCTG GCAGATACCG ATCCCGAAGA TGCCCTGCCG
CCGCTGACGG CCTACTACGC CATGCGGGTC GGGCATTTGC CGATGGTGCC CTATTACGCG
CCGGGAGATG ATGCTCTGGC CCTGGCGGTG AAAGAGCGGG CGGGCTCTGC ACATGCTGTG
CTGCTGGCCA ACCACGGGCC CGTGGTGGCG GGAAAAACCT TGCTCGATGC ACAATATGCA
GCCGAGGAAC TAGAGGAGAC GGCGAAACTT CATCTGATGT TGCAGGAGCG CAAACTGAAT
ATCCTGCCAC GGGCCGAGGC CGATCGGCTG AGCGCGATCA GCTCTGCCGG ATGA
|
|---|
| Protein sequence | MTAILSEETR MRDQIAAVGK SVFDRGLTAG STGNISVRLG DGRLLMTPTN TSLGVLDPAR
LSLLDADCNH LSGDKPTKEA FLHGCMYCRR AGANAVVHLH STHAVAVSIL ADTDPEDALP
PLTAYYAMRV GHLPMVPYYA PGDDALALAV KERAGSAHAV LLANHGPVVA GKTLLDAQYA
AEELEETAKL HLMLQERKLN ILPRAEADRL SAISSAG
|
|---|
| |