Gene Pden_3320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3320 
Symbol 
ID4581879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp480701 
End bp483268 
Gene Length2568 bp 
Protein Length855 aa 
Translation table11 
GC content65% 
IMG OID639770639 
Productvon Willebrand factor, type A 
Protein accessionYP_917092 
Protein GI119386037 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATCTC TTGTGACCGC CGGGCTTATC GCCCTGACAT CCGCCCTTGC GCCGGCGGCG 
CTTGCCCAGG AGCGCCCCAG CACGATCCTT GTTTTGGACG CCTCGGGGTC GATGTGGGGG
CAGATCGATG GGATAAACAA AATCACCATC GCGCGCGATG TCGTCGGGGA CATTGTGTCG
GATTTCCCCG CCGATCAGAA TCTCGGTTTC GTCACCTATG GCCATCGCGA GCGCGGGCAA
TGCGCGGATA TCGAAACCTT GGTCGAACCC GCGCCCGGCA CTGCGGCAGA GATCGCCGGC
ATCGTTGAAG GGTTGAACCC GCGGGGCATG ACCCCGATGA CCGATGCCGT CGTCACCGCG
GCTCAGGCGT TGCGCCACAC CGAACAGGCG GCGACGGTGA TCCTGGTTTC CGATGGGATC
GAGACCTGCA ATCCTGATCC CTGCGCCGCC GCCCGCGCAT TGGAAGAAGC GGGCGTAGAT
TTTACCGCCC ATGTCATTGG CTTCGATGTG CGGGGCGAAG CCGACGCCCT GTTGCAGATG
CAATGCATCG CCGAGGAAAC CGGCGGCCGC TTCCTGACTG CCGACAATGC CCAGGAACTC
AACGAGGCCT TGCGCGAGGT CACTGCCGCG CCTGCCTCAG GGAGTTTCAC CTTCACCGCA
AATCTCGGAG GCGAGGAGAT CGGCGACGAG ACCGTCTGGG AGCGGCCAGC AGCGCCACCG
GAGCTTCCGC TTCTGTCCGG CGAGGTGATC TGGGAGATAT CGGATACTTC GTTCAACATG
GTGCAGACCG GCACCGCGAA CCCCTTCACC ACGGACCTTC CGTTCGGCGA CTATATCGTG
ACGGTCCATT CGACGGCGCA GGACGACTTC TCGCAGACCG AGGCCAGTTT GGCGTTGGAC
AGCGCGCGCA ATGTCCACGC CATTTTCCCG CCCATCACGT CGCAACAGCC CGCCGCCCAG
GTATTCGGCC CGGCACAAAC CTTGGTTGGC TCCGCGTTTA CGGTGAGCTG GGAAGGTGAG
GGTCTGGCTC CGCGTGATTA TGTGACAATT GTCCCCGCCG ACGCCGAAGA CGGAGCCTAT
GCGGACTATG ACCGGCTGGA GAACCGTACC GAAGGCGAGC TTCGTGCACC TGCCGAGCCC
GGTCTCTACG AAGTGCGTCT GCAATTGGAC GCGGGGAACC GCGTGCTCGC CCGCACCCCG
GTCGAGGTGG TTGATGCCGA CGTCACGGTC TCCGCACCCG CCCAGGTCGT TGTCGGGTCG
GCATTCCCGG TCACCTGGCA GGGCGAGGGC CTGCACCCGC GCGACTACGT GACAATCGTT
CCCGCCGGTT CGGCGGACGG CACCTATGCC GACTACGATC GCACGCAAGG TCGGAGCGAG
GGCGAGCTGC GGGCGCCTGC CGAGCCTGGC CTCTACGAAG TGCGCCTGCA ATTGGACGTG
GGGGACCGCG TGCTCGCCCG CACCCCGGTC GAGGTGGTCG ATGCCGAGGT TGCTGTCTCC
GCGCCGGCTC AGGTCGTTGT CGGGTCGGCT TTCCCGGTCA CCTGGCAGGG TGAGGGCCTG
CACCCGCGCG ACTACGTGAC GATCGTTCCC GCCGGCTCGG CGGACGGCAC CTATGCCGAT
TACGATCGCA TGCAAGGTCG GAGCGAGGGC GAGCTTCGCG CGCCTGCCGA GCCCGGCCTC
TACGAGGTGC GCCTGCAATT GGACGCGGGG GACCGCGTGC TCGCCCGCAC CCCGGTCGAG
GTGGTCGATG CAGAGGTCAC GGTTTCCGCG TCGGCCCAGG TCGTTGTCGG TTCGGCGTTC
CCGGTCACCT GGCAGGGTGA GGGCCTGCAC CCGCGCGACT ACGTCACGAT CGTTCCCGCC
GGCTCGGCGG ACGGCACCTA TGCCGACTAC GATCGCATGC AAGATCGGAG CGAAGGCGAG
CTTCGCGCGC CTGCCGAGCC TGGCCTCTAT GAGGTGCGCC TGCAATTGGA CGCGGGGGAT
CGCGTGCTCG CCCGCACCCC GGTCGAGGTG ATGGATGGTA ATGTTTCGCT TGACGGACCG
GACAGGGCGC GGGCCGGCGC CGAGATCACG CTATCCTGGA CCGGTGCCAT ACATCCGCGC
GACTACATAG CCATCGTTCC CGGCGGCACA CCGGACGGCG AGCAAAGTGG CTATCGCCGT
ATTCAGGACG AAGATCAGGC CACGTTCACT GCACCCGCGG AGCCTGGTGC CTATGAAATC
CGCTACCATT TGGACCGCGG CGATCGGGTC ATGGCCCGGC GACCGCTCGA GGTGCTGGCG
GCGGATGCGC CGATAGACGA GGGTGCCGGG CTTATGGTTC CTGGTACAGC AAGGCCGGGC
GATATCGTTA CAGTTTCGTG GACAATCGAA GCTGGCGATG CCGACCGGCG CGTGGCGCTG
GCACGAGCTG ATGCGCCCGA CTTTACCTGG ATTACAGTCG ATCACGTGGG CGACGAAACC
GAAACGGTAA TCAAGCTCCC GGACGAGCCG GGACAATACG AAGTGCGGTT TCTCGACCTT
CAAAGCCAGA GCGTTCTCGG ACGCGCGATG ATCACGCTCG GCGAATGA
 
Protein sequence
MRSLVTAGLI ALTSALAPAA LAQERPSTIL VLDASGSMWG QIDGINKITI ARDVVGDIVS 
DFPADQNLGF VTYGHRERGQ CADIETLVEP APGTAAEIAG IVEGLNPRGM TPMTDAVVTA
AQALRHTEQA ATVILVSDGI ETCNPDPCAA ARALEEAGVD FTAHVIGFDV RGEADALLQM
QCIAEETGGR FLTADNAQEL NEALREVTAA PASGSFTFTA NLGGEEIGDE TVWERPAAPP
ELPLLSGEVI WEISDTSFNM VQTGTANPFT TDLPFGDYIV TVHSTAQDDF SQTEASLALD
SARNVHAIFP PITSQQPAAQ VFGPAQTLVG SAFTVSWEGE GLAPRDYVTI VPADAEDGAY
ADYDRLENRT EGELRAPAEP GLYEVRLQLD AGNRVLARTP VEVVDADVTV SAPAQVVVGS
AFPVTWQGEG LHPRDYVTIV PAGSADGTYA DYDRTQGRSE GELRAPAEPG LYEVRLQLDV
GDRVLARTPV EVVDAEVAVS APAQVVVGSA FPVTWQGEGL HPRDYVTIVP AGSADGTYAD
YDRMQGRSEG ELRAPAEPGL YEVRLQLDAG DRVLARTPVE VVDAEVTVSA SAQVVVGSAF
PVTWQGEGLH PRDYVTIVPA GSADGTYADY DRMQDRSEGE LRAPAEPGLY EVRLQLDAGD
RVLARTPVEV MDGNVSLDGP DRARAGAEIT LSWTGAIHPR DYIAIVPGGT PDGEQSGYRR
IQDEDQATFT APAEPGAYEI RYHLDRGDRV MARRPLEVLA ADAPIDEGAG LMVPGTARPG
DIVTVSWTIE AGDADRRVAL ARADAPDFTW ITVDHVGDET ETVIKLPDEP GQYEVRFLDL
QSQSVLGRAM ITLGE