Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3220 |
Symbol | |
ID | 4581784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 382965 |
End bp | 383393 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639770544 |
Product | thioesterase superfamily protein |
Protein accession | YP_916997 |
Protein GI | 119385942 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.921171 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGACC CCACAAGTCG GGACACATTG GAACAAAACT GGCAGCCCAT TGCACGACCG GGATTCAACG AGCTGATCGG ACCGATCGAG TTCCGCGATG ATCCGGACGG TATCCGCTTT CGCTTCCTCG CCGAAGCGAA GCATCGCAAC TCCCGTGGGG TCGTGCATGG CGGAATGCTG ATGTCCTTTG CCGATACCGC ATTGGGAACG ACGATCCGTA AGGGCCGGGC TTCCCGCGTG CAGGCGACCG TGCAACTCGA GCTGCATTTT GTCAGACCCG CCCCAATGGA TGGATTTATT GAAATGCACT GCCGGATCAT ACGGGAAACC CGCAACCTCG CCTTTGCCGA TGGGGACATT CTTGCTGATG GCGAAATCGT CGCCATGGCT CGCGGCGTCT GGAAAGTGCT CGTCTCGAAG TCAGATTGA
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Protein sequence | MTDPTSRDTL EQNWQPIARP GFNELIGPIE FRDDPDGIRF RFLAEAKHRN SRGVVHGGML MSFADTALGT TIRKGRASRV QATVQLELHF VRPAPMDGFI EMHCRIIRET RNLAFADGDI LADGEIVAMA RGVWKVLVSK SD
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