| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1667 |
|---|
| Symbol | |
|---|
| ID | 4579821 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 1648040 |
|---|
| End bp | 1648891 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639768981 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_915460 |
|---|
| Protein GI | 119384404 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase
[COG4608] ABC-type oligopeptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCG AAACCCATGT CGTCGAAGGT CGCAACCTGG TCCGCGACTA TTACGTCCCC
GGCTCGCTGA CCCGCGCCGC CAAGACGGTG CGCGCGGTCA AGGGCATCAA CTTCTCGGTG
GATCGCGGCA AGACGCTGGC CATCGTCGGC GAATCCGGGT CCGGCAAGTC GACGCTGGCG
CGGATCATCG CGCTGATCGA TCCGGCCTCG GGCGGCGAAC TCATGATCGA GGGCAAGCCG
GTCGATATCG CCAAGGCGCG GCTGACGCGC GAGATGCGCT CCAAGGTGCA GATGGTGTTC
CAGAACCCCT ATGGCAGCCT GAACCCGCGC CAGAAGATCG GCGACGTGCT GATGGAGCCG
CTGCTTCTGA ACACCGACAC GCCCTCTGCC GAGCGCCGCC GCCGCGCCGA GGAGATGCTG
GTCAAGGTCG GCCTGCCGCC CGAGGTGTTC AACCGCTATC CGCACATGTT CTCGGGCGGG
CAGCGGCAGC GCATCGCCAT CGCCCGCGCC TTGATGCTGA ACCCGACGCT GCTGGTGCTG
GACGAGCCGG TCTCGGCGCT GGACCTGTCG GTACAGGCGC AGGTTCTGAA CCTGCTCGCC
GACCTGCAGG AAGAGTTCAA CCTGGCTTAT GTCTTCATCA GCCACGACCT GTCGGTGGTG
CGCTATATCG CCGACGACGT GCTGGTGATG AACAAGGGCG AGGCGGTCGA GCAGGGCACG
CGGGAAGAGG TCTTTGCCGA CCCCAAGCAT CCCTATACGC GCGAGCTTTT CGCCGCGACC
CCGGTCACGG ATGTCGAGGC GATCCGCGAG CGCGTGGCAC GCCGCCAGGC GCTGCGCGCC
GCGACTGCCT GA
|
|---|
| Protein sequence | MSTETHVVEG RNLVRDYYVP GSLTRAAKTV RAVKGINFSV DRGKTLAIVG ESGSGKSTLA
RIIALIDPAS GGELMIEGKP VDIAKARLTR EMRSKVQMVF QNPYGSLNPR QKIGDVLMEP
LLLNTDTPSA ERRRRAEEML VKVGLPPEVF NRYPHMFSGG QRQRIAIARA LMLNPTLLVL
DEPVSALDLS VQAQVLNLLA DLQEEFNLAY VFISHDLSVV RYIADDVLVM NKGEAVEQGT
REEVFADPKH PYTRELFAAT PVTDVEAIRE RVARRQALRA ATA
|
|---|
| |