| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1654 |
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| Symbol | |
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| ID | 4580836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1635960 |
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| End bp | 1637006 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639768968 |
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| Product | lysine--tRNA ligase |
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| Protein accession | YP_915447 |
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| Protein GI | 119384391 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2269] Truncated, possibly inactive, lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00462] lysyl-tRNA synthetase-like protein GenX |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.693299 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCCG CCGATGAAAG CCCCTGGTGG GATCGCGACC GGCACGCGGG GCGCCGGCCG
CTGCTTTTGG CGCGAAACCG CATCCAGGCC GCGATCCGCG ACTGGCTGGG CACGCAGGGC
TTCATCGAGG CAGATCCGCT GGCGCTGGCC GTCAGCCCGG GAAACGAGGC GCATCTGCAT
GCCTTCGCCA CGCATCGGAT CGGCAATGAC GGGCTGGCCC AGCCGATGTA TCTGCACACC
AGCCCGGAAT TCGCCATGAA GAAGTTGCTG GCGGCGGGGG AGGAACGCAT CTTCGCCTTC
AGCCATGTCT GGCGCAATCG CGAGCGCGGC GCGCTGCACA GTCCCGAATT CACCATGCTG
GAATGGTATC GCGCCGGCGA GGATTATCGC GTTCTTTTCG ATGATTGCGC GCAATACCTT
AGGCATGCGG CCGAGGTGGC GGGCGCCGAA TTGCTGCGCT TTCGCGGCGC CGAATGCGAT
CCCTATGCCG CGCCCGAGGT GATGAGCGTC GCCGAGGCGT TCCGCGAACA TGCCGGCATC
GACCTGCTTT CGACTTGCGA CGGGACCGAA ACTGATACGC GGGCCCTGCG CGCGCAGGCC
GAACGGCAGG GGATCCGCAC GGCCCCGGAT GACGGCTGGT CCGACATCCT GTCGCGCGCG
CTGGTGGAAA GGGTCGAGCC GCACCTGGGC CATGGCCGGC CCTTGATCCT TGACCGCTAT
CCGGCGGCCG AGGCGGCGCT GGCCCGCCGT GCCGGGGACG ACCCGCGCGA GGCCGAGCGG
TTCGAGCTGT ACGCCTGCGG CGTCGAACTG GCCAACGGCT TCGGCGAACT GACCGACCCG
GTCGAGCAGC GCCGCCGCTT CGAGCTGGAG ATGGAGGAGA AGGCCCGAAT CTATGGCGAG
TGCTACCCGC TGGACGAGGA TTTCCTGGCG GCCCTGGCCT TCATGCCGGC GGCCTCGGGC
TGTGCGCTGG GGTTCGACCG GCTGGTGATG CTGGCCACCG GCGCTCCGCG CATCGACGAG
GTGATCTGGA CCCCCTTGAT TGATTGA
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| Protein sequence | MKSADESPWW DRDRHAGRRP LLLARNRIQA AIRDWLGTQG FIEADPLALA VSPGNEAHLH
AFATHRIGND GLAQPMYLHT SPEFAMKKLL AAGEERIFAF SHVWRNRERG ALHSPEFTML
EWYRAGEDYR VLFDDCAQYL RHAAEVAGAE LLRFRGAECD PYAAPEVMSV AEAFREHAGI
DLLSTCDGTE TDTRALRAQA ERQGIRTAPD DGWSDILSRA LVERVEPHLG HGRPLILDRY
PAAEAALARR AGDDPREAER FELYACGVEL ANGFGELTDP VEQRRRFELE MEEKARIYGE
CYPLDEDFLA ALAFMPAASG CALGFDRLVM LATGAPRIDE VIWTPLID
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