Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1471 |
Symbol | |
ID | 4580292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 1433351 |
End bp | 1434349 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639768786 |
Product | LysR family transcriptional regulator |
Protein accession | YP_915267 |
Protein GI | 119384211 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGAGA TGCGTCAACT ACACCAATTG ATCGCTATCG CCGAGTTTCG GAGCCTGCGC GCCGCCGCCG AAGCTCTGGA TGTGCAACAG TCGACGCTAA GCCGCACCGT CCGCGCCATC GAGGATGAGC TCGGCGCGAT ACTTCTGGAG AGGCGCCATA GCGGCGTCGA ACTCACTGAG GCCGGCCAGG CTTTCCTTCG CGAAGCCAAA TCGGCGATCG AACTGCTCGA ACGTGCGCAG CGACATGCCA GGCTTGCAGG TCGAGGAAAA ACCGGAAGTC TCACGATCGG AATTCAGACC TCCTTGGGCA CCGGCTTCCT CAAGGAACTA CTCAGGCGAT ACGCGACCGC CCATCCCCAG GTTCTGCTCA GCGCAGTCGA CGGCGCAACG AGAGAGCATG TCAGGCTCGT CGCGGCGGGC TCTCTGGACA TCGCCTTCGT GACCGATTGC GAGATCCCGG CGAACTGTGA TCACGCACAG CTGTGGCAGG AAGAAGTCTT CGTTGTCACC TCGAAGACCC ATGCACTGTC CGGCATGCCC GCTGTCAGTT GGTCTTCGAT GCGGCATGAG CGGATCCTCG TAACCGTCGC CGCGCCAGGT CCCGAGGTCG AAGCCTTTAT TCGCGGCGTT CTGGCGGTCG AAGATGATTG CGGCTTCAAG GTCGATCGGA TCGATGCGAC CCAGGAGATG CTTCTGGATC TGGTCGCCCT GAACCAGGGC ATTACGGTCG CCGTCTCCTC CTGGCAGCGA CCAAATGATC GGGAACTTTC CTATCTTCCC GTGAACGAGC CCAGAAACAG CGTGACTTTC AATGCAATCT GGAATCGAGC GAACGGCAAT CCGGCGCTCC GGCGGCTCAT AACTGCCGCA CATATCTGCG CCGGACGGCA CCGCCGCGGC ACGTCCGACT GGCTGTCAGC GCAACACTCC ATCGGTCAGG ACGGCATGTT GGGCCAACAA GTTACCATAC CCTCCAAAGG GTCCTCGCGC GATGGATAG
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Protein sequence | MIEMRQLHQL IAIAEFRSLR AAAEALDVQQ STLSRTVRAI EDELGAILLE RRHSGVELTE AGQAFLREAK SAIELLERAQ RHARLAGRGK TGSLTIGIQT SLGTGFLKEL LRRYATAHPQ VLLSAVDGAT REHVRLVAAG SLDIAFVTDC EIPANCDHAQ LWQEEVFVVT SKTHALSGMP AVSWSSMRHE RILVTVAAPG PEVEAFIRGV LAVEDDCGFK VDRIDATQEM LLDLVALNQG ITVAVSSWQR PNDRELSYLP VNEPRNSVTF NAIWNRANGN PALRRLITAA HICAGRHRRG TSDWLSAQHS IGQDGMLGQQ VTIPSKGSSR DG
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