Gene Pden_1433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1433 
Symbol 
ID4580488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1402834 
End bp1403808 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content68% 
IMG OID639768749 
Productbiotin synthase 
Protein accessionYP_915230 
Protein GI119384174 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0502] Biotin synthase and related enzymes 
TIGRFAM ID[TIGR00433] biotin synthetase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.497942 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCA CCGACTGGAC CATGGCGGAG GCCTGGGCGA TCCACGCCCT GCCCTTCGCC 
GATCTCATGC ACCGCGCCCA GACCCTGCAC CGCGCGCATT TCGACCCCAA CGCGATCGAA
ACCGCGAGCC TGCTCAGCAT CAAGACCGGC GGCTGCCCTG AGGATTGCGG CTATTGCTCG
CAATCCGCCC ATCACGACAC CGGGGTGAAG GCCACCAAGC TGATGGGAAC CGAGGAGGTT
CTGGCCGCCG CCAGGCGCGC CAAGGCCTCC GGCGCTCAGA GGTTCTGCAT GGGAGCCGCC
TGGCGCAGCC CCAAGGACCG CGACATGGAC AAGCTCTGCG ACATGGTGCG GGGGGTGGCC
GAGCTGGGGC TCGAGACCTG CATGACGCTG GGGATGCTGT CGCCCGAACA GGTCGCGCGG
CTGAAGGCGG CGGGCCTCGA CTTCTACAAC CACAACATCG ACACCTCGCC CGAATACTAC
GCGCAGATCG CCAGCACCCG CACGATGGAG AACCGTCTCG ATACCGTCGA ACAGGTCCGC
AAGGGCGGCA TCAAGGTCTG CTGTGGCGGC ATCTTGGGCA TGGGCGAGGC CGAAGAGGAC
CGCATCGCCA TGCTGGTGAC GCTGGCGACG CTCCCCGCGC ATCCCGACAG CGTGCCGGTG
AACCTGTGGA ACGAAATCGA GGGCGTGCCG GTGCAGGCGC GGGCCCAGGC CGTCGATCCC
TTCGCGCTGG TGCGCATCGT GGCGCTGGCC CGCATCCTGA TGCCTGCCTC GGTGGTGCGG
CTTTCGGCAG GGCGCACGGG GATGAGCGAC GAGTTGCAGG CACTGTGCTT CCTCGCCGGC
GCGAACTCGA TCTTCGTGGG CGACCAGTTG CTGACCACCG GCAACCCGGC GGCGTGGAAG
GACCAGGACC TGCTGTCCCG TCTGGGCATG CATATCGCCC CCGCGCAGGC GCGGCCCCGG
GTCGCGGCGG AATAG
 
Protein sequence
MIRTDWTMAE AWAIHALPFA DLMHRAQTLH RAHFDPNAIE TASLLSIKTG GCPEDCGYCS 
QSAHHDTGVK ATKLMGTEEV LAAARRAKAS GAQRFCMGAA WRSPKDRDMD KLCDMVRGVA
ELGLETCMTL GMLSPEQVAR LKAAGLDFYN HNIDTSPEYY AQIASTRTME NRLDTVEQVR
KGGIKVCCGG ILGMGEAEED RIAMLVTLAT LPAHPDSVPV NLWNEIEGVP VQARAQAVDP
FALVRIVALA RILMPASVVR LSAGRTGMSD ELQALCFLAG ANSIFVGDQL LTTGNPAAWK
DQDLLSRLGM HIAPAQARPR VAAE