| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1204 |
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| Symbol | |
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| ID | 4578586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1177372 |
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| End bp | 1178277 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639768520 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_915005 |
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| Protein GI | 119383949 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATCCGT TCGTTGCCGT GTTGATGGGA GGCACTTCCT CGGAGCGCTC CGTCAGTCTT
TCATCTGGAC ATGCATGTGC GGAAGGCTTG GCCAAGGCAG GTTACCGTGT GGCACGGGTC
GAGGTGCGGG ACGATATCGC GGAAAAGCTG CTGCAAATTC GCCCAAGCGT CGTCTTCAAC
GCATTGCACG GAACCGGCGG CGAGGATGGC GCGGTCCAGG GATTGCTGGA AAATCTTGGG
ATTCCCTATA CCCATTCCGG AGTGATGGCC TCGGCGCTTG CAATGCACAA GATCAATGCC
AAGCATGTTG CCGCCGCGCA TGGCGTTCCA GTCGCCGAGT CCATCGTGGT TTCCGCTGCC
GATGCGAGTG CTTCGCATGT GATGCAGCTG CCTTATGTCC TGAAGCCCGT TGCGGATGGG
TCCTCTTGCG GGGTTCATAT CGTGCGCAGC GGAGAGGCAC CGCCGCAACT GGCTGCGAAC
GAGGCGGAAT CGGCCGATGT CATGGCCGAA CGCTATGTTC CCGGCAGGGA GCTGACTTGC
GCGGTGCTGG GCGGAAAGGC GCTGGGTATC ATCGAAATCG TCCCCAAGGA CGGCGCATGG
TATGATTTCA GCGCCAAATA CGAGATCGGC GGTTCACGAC ATATTTGTCC AGCCGTCTTG
CCCCCGGATA TCGAGGAGAA AATCCTGCGA TATTCCGAGA TTGCACATCG GGCGATCGGC
TGCCGGGGCG TGACGCGCTC CGACTTCCGC CATGACCCGG ATACTGGAGA ACTCATCTGG
CTTGAGATCA ACACCCAGCC GGGGATGACA CCGATCTCGC TTTTGCCCGA GATTGCGGCA
CATCACGGCA TCACATTCGA GAATCTTGTC TCATGGATTA TCGAGGATGC GTCGTTGCGG
CGTTGA
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| Protein sequence | MDPFVAVLMG GTSSERSVSL SSGHACAEGL AKAGYRVARV EVRDDIAEKL LQIRPSVVFN
ALHGTGGEDG AVQGLLENLG IPYTHSGVMA SALAMHKINA KHVAAAHGVP VAESIVVSAA
DASASHVMQL PYVLKPVADG SSCGVHIVRS GEAPPQLAAN EAESADVMAE RYVPGRELTC
AVLGGKALGI IEIVPKDGAW YDFSAKYEIG GSRHICPAVL PPDIEEKILR YSEIAHRAIG
CRGVTRSDFR HDPDTGELIW LEINTQPGMT PISLLPEIAA HHGITFENLV SWIIEDASLR
R
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