Gene Pden_1007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1007 
Symbol 
ID4579756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp984197 
End bp984568 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content61% 
IMG OID639768329 
ProductIS5 family transposase OrfA 
Protein accessionYP_914814 
Protein GI119383758 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACC TGTACTGGCT GACCGACGAG CAGATGGCCA AGCTTGCCCC TTTCTTCCCG 
AAGTCGCACG GCAAGCCACG CGTCGATGAC AAGCGTGTTC TAAGCGGGAT TATCTTCATC
AATCGCAATG GTTTGCGCTG GCGAGATGCC CCCAGGGAGT ATGGGCCGCA CAAGACGCTC
TACAGCCGGT GGAAGCGTTG GAGCGAGAAA GGCATTTTCG CCAGGATGAT GATCGGGCTG
GCCGCCGACC ACGGCGAGGA AAAGACCGTG ATGATCGACG CGACCTATCT GAAAGCGCAC
CGCACCGCGA CCAGCATGGC CGCGAAAAAG GGGGGCGTGG ACGCCTCGTC GGCCGGACCA
AGGGCGGCAT GA
 
Protein sequence
MSDLYWLTDE QMAKLAPFFP KSHGKPRVDD KRVLSGIIFI NRNGLRWRDA PREYGPHKTL 
YSRWKRWSEK GIFARMMIGL AADHGEEKTV MIDATYLKAH RTATSMAAKK GGVDASSAGP
RAA