Gene Pden_0376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0376 
Symbol 
ID4579558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp350750 
End bp352792 
Gene Length2043 bp 
Protein Length680 aa 
Translation table11 
GC content66% 
IMG OID639767691 
Producthypothetical protein 
Protein accessionYP_914186 
Protein GI119383130 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.710363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAAG TCGGTCCTTG GCTCGTAGCG ACATGGAAAG CGGGCGGAAT CGGTGCTGCT 
TTGCTGAAGA CTGCCGCTGC TGTCGCGATC AACATGGCCG TGGCGAAGCT GACGGCGCCC
GGCGGTCCCC GGCCGCAGGA GATCACCACC GAACTGCGCT CCAGCAATGC CAAGCGCATT
CGCCATCTCG GCCGGGTCAG GGCATCGGGC GCCGTGATGT TCTGGGAATG GGCCTATGCC
GGCGGCGAGC GGCGGCTGTT CAAACTGCTC GCGGTCGCCC AGGGCGGCAT GAACAATGTC
CTGCAATGGT ATCTGGACGG CGAGCCGGTC GAGGTCGATG CCAATGGCTA TGTCACCACG
GCACCGTGGA ACAAGGGCAA TATCCGTCTC CGCTGGCGGA AAGGCATCCA GGGCGATCAA
TGGGACGGCG GCAACTATGC CGACCTTCGC GCCGCCTTTC CCTCGCAATG GACCGAAGCG
CATCGCCTGC GCGGTGTCGG CACGATCCTG GCCACGTTCG ACGCGGTGGG CGGCGAGGAT
ATCGCGGAGG TCTATTCCGG CGGCGAGCCC GAGGTTTCGG CGCTGATCGA GGGGGCGAGC
GGCTACTGGG CCGTGGATGG GTCCGCGATC AACGGGCGCA ACCCGGCGGT GCATCTGTCC
GATATCGTGG CCAATCCGGT CTACGGTGCC CTGGCCCCGT CGGATATCGA TCTGGCCTCG
CTCGGCGTGG CGCGCAGCGA TTGCAACGCC GATGTCCCGA CCGATGGCGG CACGCGCAGC
CGCTACCAGT CCGGTATCAG CTATGCGCTG TCCGATCCGA TCAAGGACAC GGCGCAGAAG
CTTCTGGATG CCATGGGCGG CCGGGCCTGG ATCACGCCGG AAGGCAAGCT CGCCGTCGAA
GCTGGCGTCT GGCGGCCGCC GACGGTGACG ATAGAGGAGC GTCACATCGT CGAGATGGAA
TACGGCGCCG GGACCGAGCG TATCAATCGG GTGACCACCC TGGTGCCGAC CTATGTCGCG
CCGCAGGTGC GCTGGCAGGA AGCCAATGCC GATCCGGTCG AGGATGCCGA TGCGATCGCC
CGCTGGGGCG AAGGGGAGCC GAAGGGCGTC GATCTGTTGC CGGTGCAGCA CCATGGTCAG
GCCGGGCATC TCTGCAAGCA GATGCTGGCG CGAATGAACC CGGATCGGCG GATGACGGTC
AAGCTGCGGG CCTTCGGCCT GCGCCTGATC GGGGAGCGCC TGGTGGCGTT GAACATTCCC
CGGCTCGGGC TGGTTTCCGT GCCCTTCTGG ATCGACGGCC TGGAGTTCGA CGGCACCAAT
GTCATGGTCG ACCTGATCGA GGCCGAGCCC GCTTCGTTCG ACTGGACGGC CGAGGAGGAG
GGTGAGCCGC CGGCGGTGCT GACGGATATC GACCGCGGCA CCGCGACACG GGATGCCGCA
ATCACCAGCG TCACGCTCAT CACCGATGAC GGGCCGCCCT ATATCAGGAT CGAGGGCACC
CTTTCCGCCC AGCGTGGCGA TCAGCTGATG GCCCAGTTCC GGCGCACCGG CAGCGCCTTG
GCGTGGACGG ACATGATCAG CGAGGCGACC TCGGGGAATG GGTTCTCGTT TCGGACGATG
CCACTGGGCG ACCTGTCCGA ATACGATTTC CGGGTCTTCT TCGGCCGCTA CAGCAACGGG
TCCAGTGGCC GCGAGCTGCA GATGCTGTCC GTCCCGGTTG TCGTGACCGG GGTTGACGTC
GTGGCCAACG GTAACCCGCC GGATGAGCCT GTCGTCATAT CCGCCAGCGG CAGCGCGGGA
GACAACTTGA TCGTCACCTT CACGGTAGAC CTCGGCGCGA ACTACCACCG CACCGGGCTT
TATCGCGCCG CGTCCGGGGC GCCCTTCGGC TCCGCGACGC TGGTCAAATG GTCCTTCGAC
CAGTCTTCGC AGGTGACGAT GACGGCCGCC ATTCCGCCTT CCGGTGCGCG GTTCTGGCTG
CGCTCCGAGA ACGAATCGCA GGTCGGGTCC GACCCGGTCG AGGTCGGCGA CTACCCGGCC
TGA
 
Protein sequence
MPQVGPWLVA TWKAGGIGAA LLKTAAAVAI NMAVAKLTAP GGPRPQEITT ELRSSNAKRI 
RHLGRVRASG AVMFWEWAYA GGERRLFKLL AVAQGGMNNV LQWYLDGEPV EVDANGYVTT
APWNKGNIRL RWRKGIQGDQ WDGGNYADLR AAFPSQWTEA HRLRGVGTIL ATFDAVGGED
IAEVYSGGEP EVSALIEGAS GYWAVDGSAI NGRNPAVHLS DIVANPVYGA LAPSDIDLAS
LGVARSDCNA DVPTDGGTRS RYQSGISYAL SDPIKDTAQK LLDAMGGRAW ITPEGKLAVE
AGVWRPPTVT IEERHIVEME YGAGTERINR VTTLVPTYVA PQVRWQEANA DPVEDADAIA
RWGEGEPKGV DLLPVQHHGQ AGHLCKQMLA RMNPDRRMTV KLRAFGLRLI GERLVALNIP
RLGLVSVPFW IDGLEFDGTN VMVDLIEAEP ASFDWTAEEE GEPPAVLTDI DRGTATRDAA
ITSVTLITDD GPPYIRIEGT LSAQRGDQLM AQFRRTGSAL AWTDMISEAT SGNGFSFRTM
PLGDLSEYDF RVFFGRYSNG SSGRELQMLS VPVVVTGVDV VANGNPPDEP VVISASGSAG
DNLIVTFTVD LGANYHRTGL YRAASGAPFG SATLVKWSFD QSSQVTMTAA IPPSGARFWL
RSENESQVGS DPVEVGDYPA