Gene Pden_0188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0188 
Symbol 
ID4578826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp170847 
End bp171662 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content65% 
IMG OID639767505 
Productregulatory proteins, IclR 
Protein accessionYP_914000 
Protein GI119382944 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTCCGG CGCGGAGTGA GGGAAGACGA ACCATGGGTG CAGCCAAGTC CACCGCGACC 
CAGGCGAAGG AGCCGCCGAA CTATTCCGCG CCGGCGCTGG AAAAGGGGCT GGATATCCTG
GAGCTGCTTC ATGAAAGCGA AACGGCGCTG ACGCAGAAGG AAATCGCGAC CCGCCTCGGC
CGCAGCGTCA GCGAGCTTTA CCGGATGGTC AGCATCCTGG TGCGGCGGAA CTATGTCGCG
AATTACGGCG ACAAGTTCGG CCCCACGACC AAGCTGTTCA AGCTGTCGCA GGCGCATCCA
CCGGTGCGGC GCCTGCTGAC GGCGGCGATC CCGATCATGG AGGAGCTGTC GAGAGATGTC
GATTTCGGCT GCGACCTGCG GGTCTATAAT CGCGGGTCGC AGACGGTGCT TGCCGCCGTG
GATGCGCCCA GTGGCCTGGG GTTCTCGGTG CGCACGGGAT CGGAAATCGC CGTGGCCCCG
TCCGCTTCAG GCCGGGTGCT GATCGCCTTC CAGGACAGCG ACACCATGGA ATTGCGCATC
CGCGAGGCGT TCGACGGACG GCCCGAATCC GAACTGAGGG CCTTCCGCAA AGAGGTCCAC
GAGGTCGCCG TCAAGGGATA TGCCGCCCTG CAAAGCCGCC AATACGAAGG GCTCTACGCG
GTGTCCTATC CCATCCTCGA TGTCAATCAC CACGCCGTCG CGGCGCTGAC GGTGCCCATG
CTTCCCCGGA TCGACGGCGT GCGCCAGGTC GCCCGAGAGG ATGTCATCAC CGCCCTGCGC
GATGCCGCCG CGCGGCTGTC AAAGCGGATC GGATAG
 
Protein sequence
MCPARSEGRR TMGAAKSTAT QAKEPPNYSA PALEKGLDIL ELLHESETAL TQKEIATRLG 
RSVSELYRMV SILVRRNYVA NYGDKFGPTT KLFKLSQAHP PVRRLLTAAI PIMEELSRDV
DFGCDLRVYN RGSQTVLAAV DAPSGLGFSV RTGSEIAVAP SASGRVLIAF QDSDTMELRI
REAFDGRPES ELRAFRKEVH EVAVKGYAAL QSRQYEGLYA VSYPILDVNH HAVAALTVPM
LPRIDGVRQV AREDVITALR DAAARLSKRI G