Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0188 |
Symbol | |
ID | 4578826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 170847 |
End bp | 171662 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639767505 |
Product | regulatory proteins, IclR |
Protein accession | YP_914000 |
Protein GI | 119382944 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTCCGG CGCGGAGTGA GGGAAGACGA ACCATGGGTG CAGCCAAGTC CACCGCGACC CAGGCGAAGG AGCCGCCGAA CTATTCCGCG CCGGCGCTGG AAAAGGGGCT GGATATCCTG GAGCTGCTTC ATGAAAGCGA AACGGCGCTG ACGCAGAAGG AAATCGCGAC CCGCCTCGGC CGCAGCGTCA GCGAGCTTTA CCGGATGGTC AGCATCCTGG TGCGGCGGAA CTATGTCGCG AATTACGGCG ACAAGTTCGG CCCCACGACC AAGCTGTTCA AGCTGTCGCA GGCGCATCCA CCGGTGCGGC GCCTGCTGAC GGCGGCGATC CCGATCATGG AGGAGCTGTC GAGAGATGTC GATTTCGGCT GCGACCTGCG GGTCTATAAT CGCGGGTCGC AGACGGTGCT TGCCGCCGTG GATGCGCCCA GTGGCCTGGG GTTCTCGGTG CGCACGGGAT CGGAAATCGC CGTGGCCCCG TCCGCTTCAG GCCGGGTGCT GATCGCCTTC CAGGACAGCG ACACCATGGA ATTGCGCATC CGCGAGGCGT TCGACGGACG GCCCGAATCC GAACTGAGGG CCTTCCGCAA AGAGGTCCAC GAGGTCGCCG TCAAGGGATA TGCCGCCCTG CAAAGCCGCC AATACGAAGG GCTCTACGCG GTGTCCTATC CCATCCTCGA TGTCAATCAC CACGCCGTCG CGGCGCTGAC GGTGCCCATG CTTCCCCGGA TCGACGGCGT GCGCCAGGTC GCCCGAGAGG ATGTCATCAC CGCCCTGCGC GATGCCGCCG CGCGGCTGTC AAAGCGGATC GGATAG
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Protein sequence | MCPARSEGRR TMGAAKSTAT QAKEPPNYSA PALEKGLDIL ELLHESETAL TQKEIATRLG RSVSELYRMV SILVRRNYVA NYGDKFGPTT KLFKLSQAHP PVRRLLTAAI PIMEELSRDV DFGCDLRVYN RGSQTVLAAV DAPSGLGFSV RTGSEIAVAP SASGRVLIAF QDSDTMELRI REAFDGRPES ELRAFRKEVH EVAVKGYAAL QSRQYEGLYA VSYPILDVNH HAVAALTVPM LPRIDGVRQV AREDVITALR DAAARLSKRI G
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