Gene Pden_0180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0180 
Symbol 
ID4578818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp161423 
End bp162874 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content69% 
IMG OID639767497 
Productaldehyde dehydrogenase 
Protein accessionYP_913992 
Protein GI119382936 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.225137 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACGC TTCTGCATAT CGACAACGAA CCCGTTTCGG CGACCGATGG CGCGACCTTC 
GAACGGGTGG CGCCGCATAC CGGCCAGACC GTGACCCGCG GCGCCGCGGC GGGGATCCGC
GACAGCCTTG CCGCCGTCGA TGCCGCCAGC CGCGCCTTTG TCGAATGGTC GCGCAGCGGG
CCGGGCCAGC GCCGCGCGCT GCTGCTGAAG GCCGCCGACG AGATCGAGGC GCGCATGGGC
GATTTCGTCG CCGCCATGCA GGCCGAGGTC GGCGCGAACG CGCTGTGGTC GCAGTTCAAC
GTCATGCTGG CCGCCAACCT GTTCCGCGAG GCGGCCGGGC TGGCCACCCA GATCCAGGGC
GAGACGATCC CCACCGACAA GCCCGGCACC CTGTCGATGA CCCTGCGCCA GCCCTGCGGC
GTGGTGCTGA GCATCGTGCC CTGGAACGGT CCGGTCGTGC TGGCCGCGCG CGCCATCGCC
TATCCGCTGG TCTGCGGCAA CACGGTGGTG TTCCGCGCCT CGGAAACCAG CCCGCGCACG
CATGAGCTGA TCGCCCAGGC CGTCTATGCG GCGGGTTTCC CGGCGGGCAC GCTGAACTTC
ATCACCCATG ACCTGTCCAC CGCCCCCGAG GCGATCGAGG CGCTGATCGC GCATCCGGCG
GTGCGGCGGG TGAACTTCAC CGGCTCGACC GCGGTGGGGC GGATCATCGG CGAAAAGGCA
GGCAAGCACC TGAAACGCTG CATCCTGGAA CTGGGCGACA AGTCCCCGCT GGTGGTGCTG
GACGATGCGC GGGTCGATGA CGCGGTGACG GCGGGCATCT TCGGCGCCTT CCTCTATCAG
GGCCAGATCT GCATGACGAC CGAGCGGATC ATCGTCGATG AGAAGATCGC CGACGATTAC
GTTGCGAAAT TCGCGGCCCG CGCCAGGGAA CTGCCGCTTG GCGATCCGAC GACGCAAGCG
GCCTGCGTCT TGGGGCCGGT CATCAGCATG AAGGCGGCGG ACCGGCTGAA GGGGCTGCTG
GACGACGCGG TGGCCAAGGG CGCGCGGATC GTCGCGGGCG GGCATGGCGA GGGCGCGATG
ATGCCCGCCA CCGTGCTGGA CGGCGTGACC CCCGAGATGC GGATCTATGC CGAGGAAACC
TTCGGCCCCA TCGTCTCGAT CATCCGCGCC AAGGGCACCG AGGACGCGAT CCGCATCGCC
AATGACACCG AATTCGGGCT GTCGGCCGGC GTCTTCGGGC AGGATGTCAC CCGTGCGCTG
GAGGTTGCGG CGCGGCTGGA GACCGGGTCG GTCCATATCA ACGGCGCCAC CGTCCAGAAC
GAGGCGCAGG CCCCCTATGG CGGTACCAAG GCCAGCGGCT TCGGCCGCTT CGACGGCCGC
GCGGTCATCG ACGAGTTCAC CGAACTGAAA TGGCTGACCA TCGAGCAGAG CGGCCAGGGC
TATCCGTTCT GA
 
Protein sequence
METLLHIDNE PVSATDGATF ERVAPHTGQT VTRGAAAGIR DSLAAVDAAS RAFVEWSRSG 
PGQRRALLLK AADEIEARMG DFVAAMQAEV GANALWSQFN VMLAANLFRE AAGLATQIQG
ETIPTDKPGT LSMTLRQPCG VVLSIVPWNG PVVLAARAIA YPLVCGNTVV FRASETSPRT
HELIAQAVYA AGFPAGTLNF ITHDLSTAPE AIEALIAHPA VRRVNFTGST AVGRIIGEKA
GKHLKRCILE LGDKSPLVVL DDARVDDAVT AGIFGAFLYQ GQICMTTERI IVDEKIADDY
VAKFAARARE LPLGDPTTQA ACVLGPVISM KAADRLKGLL DDAVAKGARI VAGGHGEGAM
MPATVLDGVT PEMRIYAEET FGPIVSIIRA KGTEDAIRIA NDTEFGLSAG VFGQDVTRAL
EVAARLETGS VHINGATVQN EAQAPYGGTK ASGFGRFDGR AVIDEFTELK WLTIEQSGQG
YPF