| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1086 |
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| Symbol | |
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| ID | 4034695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | + |
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| Start bp | 1307671 |
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| End bp | 1309611 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637973551 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_580351 |
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| Protein GI | 93005914 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components
[COG4176] ABC-type proline/glycine betaine transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.809733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.592465 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCCAAT GGATTGCATT TAGCTTATTG CTTGTAAGCT CGCTTTTACT GTCTTTGCCA
GTATCAGCTG CTGTGCCAAC ATGCCAAGCA CCGATTAAAT TTGGGGCATT GACATGGGAG
AGTGGTCAGT TCACAAGCGG TGTATTAAAA TATATCATTG AGAGCGGCTA TGGCTGTCAG
GTAGAGGAGG TGCCGGGAGC AGGTCCTGCA CTTGAAACGG CATTGTCGCA AGATGATATC
CAAATCATTG GAGAGCAGTG GGTAGGGCGC TCACCCATCA TGACACAAGC TATTGAGCAG
AATAAAGTCG CTGTTATTGG TGACACGCTT AAGGGCGGTG CAACTCAAGG TTGGTATGTT
CCTAAATATG TACTGGACGA AAACCCGGGT CTACGCCGTT ATCAAGATCT GCCTAAATAC
GCTGAGCTGT TTAAAGACCC TGAAAACCCT AGTAAATCAC GCTTTATGAA CTGTCCATCT
GGTTGGACGT GTGAGATTTT TAATACGCGA TTGCTGAAAA ATACTGGCTT GGAGAGTGAT
TTTAACAATG CTCATCCCGG CACAGGCGCA GCCCTTGATG CCGAAATTGC CTCTGCTTTT
GAGCAGCATA AGCCACTCTT ATTTTATTAC TGGCAGCCGA CAGGTTTGAT GGCAAAATAC
GATTTTGCCG CATTAGAATT TCCAGCCCAT GATGATGCCT GCTGGCAAGA CTTATTACTT
GCTGATGGCA CAGCTGATTG CGTGTCTGGA TTTCCTGTAT CGCCTTTAGG TATCGCTGTA
TCTACCCCGT TTATCAATGC CAATCCTGAG CTTGCAGATG TTTTCAAAAA AATCCAATTT
AGCCCCGCTG AGCTTAATGG TGCTATTTTA GAGATGAGTG AAAGCAAACG TAGCGGGGAG
GAGCAAGCCT TTGTTTTTCT GCGTGATAAC CCCCAAGTTT GGCAGCAGTG GTTATCGGAC
GAGGCAGCTA CCAACCTTGC AGCTAAATTA GGTATTAGTC TAACAGGCGC TACTATCGTG
ACTGATAATA CAGCTTCTAG CACGAACCTA GCAGACCTAT CATCTATCTT CCCTTCATGG
TCACTTGAAT CTCCACTGAA TAACACCTTA GCCAGCGTCG TTCGCAATCA TGGCGACGTA
TTCCGTACGA TCAGTACCGT CGCCTTAACG TATTTATTGC TTCCTATTGA GCGCCTATTA
ACGCTTATCC CACCATGGCT AATTATTGCC CTTGTGACGG TATTGGCATG GTTTGCTGTA
CGTAAAATTT GGTTTGCCTT AGCATGTGGT GCTGGGTTGT TCTTGATTGG GGCATTTGGT
TTATGGGGCG CATTGATTGA TACCTTGGCA TTGCTCATCG TTTCAGTATG GGTAACGGTG
GTTATTGGTA TTCCTATCGG CATTGCCATG TCAGGAAGTA AGCTATTGCG TAAGATTGTG
ACGCCTGTAT TAGATGTGAT GCAAACCATG CCAAGCTTTG TTTATCTGAT ACCGGTACTG
ATGCTATTTG GTATTGGTAA AGTGCCAGCG CTGTTTGCCA CCATTATTTA TGCATTACCG
CCGCTTATTC GTCTGACGAC CTTGGGTATT ACTCAAGTGA ATCATGAAAT GGTGGAAGCA
GGACGCTCGT TTGGCAGTAC GCATCTGCAA TTGCTTATTT GGATTAAGCT ACCACAAGCG
CTGCCCAGTA TCATGGCAGG GGTGAATCAA GCCGTCATGA TGTCACTGTC TATGGTGGTA
TTGGCGTCCA TGATCGGAGC GCCAGGTCTT GGTGAAGATG TATTGCAATC TATTCAAACG
CTCAATATTG GCCAAGGCTT ACAAGCAGGT ACGGCGATTG TCATTGTGGC GATTATCATT
GACCGCATTA CTCAGGCGTT TGGGCAAGGT AAGCGTGCGC GCCAAAAAAC CATTGAAGCT
GGTAGACGCC CGATTGGTTA A
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| Protein sequence | MRQWIAFSLL LVSSLLLSLP VSAAVPTCQA PIKFGALTWE SGQFTSGVLK YIIESGYGCQ
VEEVPGAGPA LETALSQDDI QIIGEQWVGR SPIMTQAIEQ NKVAVIGDTL KGGATQGWYV
PKYVLDENPG LRRYQDLPKY AELFKDPENP SKSRFMNCPS GWTCEIFNTR LLKNTGLESD
FNNAHPGTGA ALDAEIASAF EQHKPLLFYY WQPTGLMAKY DFAALEFPAH DDACWQDLLL
ADGTADCVSG FPVSPLGIAV STPFINANPE LADVFKKIQF SPAELNGAIL EMSESKRSGE
EQAFVFLRDN PQVWQQWLSD EAATNLAAKL GISLTGATIV TDNTASSTNL ADLSSIFPSW
SLESPLNNTL ASVVRNHGDV FRTISTVALT YLLLPIERLL TLIPPWLIIA LVTVLAWFAV
RKIWFALACG AGLFLIGAFG LWGALIDTLA LLIVSVWVTV VIGIPIGIAM SGSKLLRKIV
TPVLDVMQTM PSFVYLIPVL MLFGIGKVPA LFATIIYALP PLIRLTTLGI TQVNHEMVEA
GRSFGSTHLQ LLIWIKLPQA LPSIMAGVNQ AVMMSLSMVV LASMIGAPGL GEDVLQSIQT
LNIGQGLQAG TAIVIVAIII DRITQAFGQG KRARQKTIEA GRRPIG
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