| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_3116 |
|---|
| Symbol | |
|---|
| ID | 3725824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 3634668 |
|---|
| End bp | 3635498 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637752728 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_358521 |
|---|
| Protein GI | 77920706 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2107] Predicted periplasmic solute-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.00331427 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTGCC TTTCCCTGGG GATCTCGCCC TGCCCCAACG ACACATCGGT CTTTTTCGGT
CTGCTCAGTG GCCAAATCCC CCTGCCCGGC TTGAGGTTGC ACCTGCGCAT CGAGGATGTG
GACACCCTCA ACCGGTTGGC ATTTGACCGG GTTCTCGATG TAACCAAACT GTCTTTCTAT
GCCTACGGTC AGCTGCGTCG GGATTACGCG TTGTTGCGAA GCGGAGCCGC CCTGGGGCGA
GGTTGCGGAC CTCTGGTGGT CGCGCGGGAG AACCTTTCCG GCAGATGCCT GGTCGGCAAG
CGCATCGCCG TGCCGGGACA CATGACCACG GCCTGTCTGT TGTTGCGGCT TTATGGGATG
GAACTGTGCC ACTTGGAACC GATGCCGTTT CACGCCATTG CCGCGGCGGT CGCCAGCGGG
GCGGTGGATG CCGGGGTGCT TATCCACGAG GCCCGTTTTA CCTGTGAAGC TCAAGGCCTG
GTCAAGGTGC TCGATCTGGG TAGCTGGTGG CAGACGTTGA CCGGGCTGCC CTTGCCTTTG
GGGTGTATCG TGGCGCGACG GAGTCTTGGC AGGGCGACTC TGGGACAGAT CGAGGATGCC
GTGCGGCACA GCATCGATAC GCTGCAGGCG ATGCCCGATG CCGCGCGCGA CTTTATTCGT
CGTCACGCCC AGGAAAACGA CGATGCCGTT CTCGATGGCC ATATCGGTCT CTATGTCAAC
GAATTCACCC ATGATTTAGG GGCTGAGGGC GAGGCCGCCG TAAAGGAGCT CTATGCCAGA
GCCGAAGCCG AAGGATTGCT GCCGGCCTGT TCATGCGGCC TGTTCGGGTA A
|
|---|
| Protein sequence | MRCLSLGISP CPNDTSVFFG LLSGQIPLPG LRLHLRIEDV DTLNRLAFDR VLDVTKLSFY
AYGQLRRDYA LLRSGAALGR GCGPLVVARE NLSGRCLVGK RIAVPGHMTT ACLLLRLYGM
ELCHLEPMPF HAIAAAVASG AVDAGVLIHE ARFTCEAQGL VKVLDLGSWW QTLTGLPLPL
GCIVARRSLG RATLGQIEDA VRHSIDTLQA MPDAARDFIR RHAQENDDAV LDGHIGLYVN
EFTHDLGAEG EAAVKELYAR AEAEGLLPAC SCGLFG
|
|---|
| |