Gene Pcar_2016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2016 
Symbol 
ID3724707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2348521 
End bp2348967 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content48% 
IMG OID637751618 
Productuniversal stress protein UspA-like protein 
Protein accessionYP_357427 
Protein GI77919612 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGATT TCAAGACGGT ATTGTTTGCA ACTGATTTTT CGGAAAATTC CGAGTATGCG 
TTCGAATATG CGCTGGCGAT GGCCCGCAAA TATGAATCCC TGCTGGTTAT AGTCCATGTC
ATTAACGAAC CGGTCGACTT GCGTGGATTT TACGTGCCGC ATATTTCTTT CGAATCCCTG
GAAGAGGAAA TAGAAGAAGG TGCTCGCAAG ATGATGGAAA AGTTTTGCCG TATGCACATC
GCCGATTATG AAAACTACCA GACCTTTATT GTCCCTGGCA TCCCTTACGA TGAGATTATC
AAAAAAGCCA TGGAGCTACC CGCCGATCTC ATCATTATGG GGACTCAGGG CCGTTCCGGT
CTGGATCATG TCTTGTTCGG AAGTACCGCC GAGAAGGTGG TGCGCAAATC CCCGGTACCG
GTTATGACCG TGCGTGTTCC AGCCTGA
 
Protein sequence
MKDFKTVLFA TDFSENSEYA FEYALAMARK YESLLVIVHV INEPVDLRGF YVPHISFESL 
EEEIEEGARK MMEKFCRMHI ADYENYQTFI VPGIPYDEII KKAMELPADL IIMGTQGRSG
LDHVLFGSTA EKVVRKSPVP VMTVRVPA