| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1715 |
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| Symbol | |
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| ID | 3724424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 2005335 |
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| End bp | 2006837 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637751319 |
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| Product | putative cation efflux system transmembrane protein |
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| Protein accession | YP_357128 |
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| Protein GI | 77919313 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.0232855 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCCTT TAAAGAAACG GTTTTTCTTT ATCCTCCTTT TCGTTTTTCT CTCCGTCGGC
GGTGTCTGGT ACGGCGTGCA CCGGGCGGGC TCCCTTGCGG AGCATGCATC TCACGACGTC
GAAGGAACTC AAATCGCCAG GCAGCAATAC ACCTGCGGTA TGCACCCGAT GATCATTACC
GATGAACCGG GTGACTGCCC CATCTGCGGC ATGGCTCTCA CCCCCGTCAA ATCGGGAACC
ACCGGTCAAA TGCAGGCCGC AGATGTGCCG CAGGGCGATA AGCCCAAGGG AGAACGCAAG
ATCAAGTACT GGGTGGCGCC GATGGACCCG ACCTACATCC GCGACGAGCC GGGTAAATCG
CCCATGGGCA TGGACCTGGT GCCGGTCTAT GAAGACCAGG CCCCAAGCGG CGCGACCATC
GCCATTGATC CGGTAACTGC CCAGAACATG GGGGTGCGCA CGGCTTCAGC GGAACGTCGC
CATATGCATC GCAAGATCCG CACAGTCGGC ACCATTAAAT ATGACGAGCC GAAGGTAACC
TCCATCAACG CCAAAGTCGA CGGCTGGATC GAGAGATTGT ATGTCGACGA AACCGGGCAG
ATGGTGAAGA ACGGGCAGCC GCTGTTGGCA CTCTACAGCC CCAAACTGGT TTCGGCCCAG
CAGGAATATC TGCTGGCCCT GCGAAACAGG GATGCGCTGA AAAACAGCTC CTTTGAAGAA
ATTGCTGCCG GGGGCGATCG TCTGTTGACG GCGGCCCGCC AACGCCTGCG TTATTGGGAC
ATCAGCGAAC GGCAGATCAG CCGTTTGGAA AAAACCGGAA AGGTGCACAA AACCTTGACC
CTCTACGCTC CCTCCAAGGG GGTGGTGACT ATGAAGATGG CCATGCCCGG CCAGTTTATC
AAGGCCGGTC AGGAGCTTTT TCAGATCAGC GATATATCCA AAGTATGGGT CTATGCGGAT
ATTTACGAAT ACGAACTGCC CTGGATCGAG ACGGGGCAGG AGGCCGAAGT GATCCTGCCT
TTTGTAGGCG GCCAATCCCT TAAGGCGAAC ATCGACTATA TCTATCCCTA TGTGGAGCCC
CAGACCCGTA CGGTAAAGGC ACGGATCGTA TTCGACAATC CCGGTCTGGA ACTCAAACCC
GACATGTACG TCAATGTGCG GATTCATGGT ATGGAAGTCA AGGATGCCTT GGCTGTGCCG
AGCGAAGCCG TGCTCAATTC CGGAGAGAAA CAGACGGTGT TCGTCGCTCT GGGTGACGGT
AAGTTCGAGC CGCGCCAGGT GAAGACCGGC GTACAGGATC AGGAAGGTTT CACCGAAATC
ACCCAGGGGC TTCTGGAAGG GGAGACGGTG GTGACCAGCG CCCAGTTCCT GTTCGATTCG
GAAAGCAAAC TGCGCGAGGC GATCCAGAAG ATGCTGGAGC CGAAAACAAC CGAGTCTTCG
CCGTCCGAGG ATCATGCCGG GCACGATATG CCGGAGGAAG ATCTCGAGGC ACTGTTTGAA
TAA
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| Protein sequence | MTPLKKRFFF ILLFVFLSVG GVWYGVHRAG SLAEHASHDV EGTQIARQQY TCGMHPMIIT
DEPGDCPICG MALTPVKSGT TGQMQAADVP QGDKPKGERK IKYWVAPMDP TYIRDEPGKS
PMGMDLVPVY EDQAPSGATI AIDPVTAQNM GVRTASAERR HMHRKIRTVG TIKYDEPKVT
SINAKVDGWI ERLYVDETGQ MVKNGQPLLA LYSPKLVSAQ QEYLLALRNR DALKNSSFEE
IAAGGDRLLT AARQRLRYWD ISERQISRLE KTGKVHKTLT LYAPSKGVVT MKMAMPGQFI
KAGQELFQIS DISKVWVYAD IYEYELPWIE TGQEAEVILP FVGGQSLKAN IDYIYPYVEP
QTRTVKARIV FDNPGLELKP DMYVNVRIHG MEVKDALAVP SEAVLNSGEK QTVFVALGDG
KFEPRQVKTG VQDQEGFTEI TQGLLEGETV VTSAQFLFDS ESKLREAIQK MLEPKTTESS
PSEDHAGHDM PEEDLEALFE
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