| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1377 |
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| Symbol | |
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| ID | 3723493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 1615835 |
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| End bp | 1616836 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637750967 |
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| Product | site-specific recombinase XerD |
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| Protein accession | YP_356794 |
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| Protein GI | 77918979 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02249] integron integrase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0000056918 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACA AGCAAAAGTT CCATCCAAAT CCTGAACTGA AACTCATGGA CCAGGTCCGT
GAGGTGCTGC GATATCACCA CTATGCCTAC CGAACTGAAC AGAATTATTG CCAGTGGATC
GTTCGCTTCA TCAGGTTTTT CGATGCGAAG ATCCATCCCA AGGATATGGG CAAAGGGGAA
ATCGAATCCT TTTTGAGTCA TTTGGCAACC GAGGGAAATG TATCCGCCGC AACGCAGCGA
CAGGCATTAA ATGCCATTAT ATTTCTTTAC AAGAGGGTAC TTGATCAACC GGTTGACGAA
ATACTTGAAC ACATTAGAGC CAAAAGGAAA CGGCGACCAC CGATCGTTTT AAGCCAGGGG
GAGGTCCAAA AGGTACTCAA TCAAATGACG GGCACACATT TGCTGATGAC CCAACTGTTA
TATGGCGGGG GATTGCGATT AATGGAATGC ATACGATTAC GCATTCAGGG TCTCGATTTT
GAAAGGAACC TTATCTATCT TCGCGATGGC AAGGGCGGAA AGGATCGCAC AACCATTTTT
CCCGCCTCCA TGAAAAGAGC ATTGCAAAAA CACGTCGAGA AGGTCAAACA GCTGCATGAA
CAGGACCTGG CTGATGGTTA CGGTACAGTT TTTCTCCCCC ATGCCCTGGC AAAAAAATAC
CCTAAAGCAC CACAGGAGTT TGGCTGGCAA TATCTCTTCC CGGCCAGAGG GCGTAGCACC
GATCCACGCT CCGGCAAGAT TCGCCGCCAT CATGTCCTTG AGTCCGGCTT GCAAAAGGCG
GTAAAGGTTG CGGTAAACCG TGCCGGAATC CATAAAAGAG TCGGCTGTCA TACCTTTCGC
CATTCGTTCG CGACCCACTT GCTGGAAAAC GGTGTGAATA TCCGCGTGGT GCAGGAACTG
ATGGGGCATG CCGACGTCAA AACCACTGAG ATTTACACCC ATGTCATGGC CAAGGATATC
AATGCGGTGG CCAGCCCTCT GGATTCCCTT GAAAAACCGT AA
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| Protein sequence | MKNKQKFHPN PELKLMDQVR EVLRYHHYAY RTEQNYCQWI VRFIRFFDAK IHPKDMGKGE
IESFLSHLAT EGNVSAATQR QALNAIIFLY KRVLDQPVDE ILEHIRAKRK RRPPIVLSQG
EVQKVLNQMT GTHLLMTQLL YGGGLRLMEC IRLRIQGLDF ERNLIYLRDG KGGKDRTTIF
PASMKRALQK HVEKVKQLHE QDLADGYGTV FLPHALAKKY PKAPQEFGWQ YLFPARGRST
DPRSGKIRRH HVLESGLQKA VKVAVNRAGI HKRVGCHTFR HSFATHLLEN GVNIRVVQEL
MGHADVKTTE IYTHVMAKDI NAVASPLDSL EKP
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