Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_1062 |
Symbol | |
ID | 3723925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 1249798 |
End bp | 1250145 |
Gene Length | 348 bp |
Protein Length | 115 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637750653 |
Product | HIT family hydrolase |
Protein accession | YP_356482 |
Protein GI | 77918667 |
COG category | [F] Nucleotide transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.000102876 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGACA ACTGTCTTTT TTGTAAAATC ATTGCCGGCG AAATACCGGG CACGTTTATC TACGAGGACG AAAAGGTCGT GGTGTTGCAG GATATCGCAC CGCAAGCGCC GCATCATTAT CTGATCATCC CGCGTAAGCA TATCCCCACC ACCCTCGATC TGGCCGTTGA GGACAACGCG CTTGTCGGAC ATGTTTATCA GGTCGCCTCA CGACTGGCCG AACGACACGG TTTCGAGAAG GACGGCTTCC GGGTTGTCAA CAACTGCAAC GAAGGCGCCG GTCAGACCGT CTGGCACCTG CATTTTCATC TGCTTGGCGG CCGCACCATG AACTGGCCTC CGGGGTAA
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Protein sequence | MTDNCLFCKI IAGEIPGTFI YEDEKVVVLQ DIAPQAPHHY LIIPRKHIPT TLDLAVEDNA LVGHVYQVAS RLAERHGFEK DGFRVVNNCN EGAGQTVWHL HFHLLGGRTM NWPPG
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