Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_0760 |
Symbol | |
ID | 3723254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 899837 |
End bp | 901033 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637750352 |
Product | hypothetical protein |
Protein accession | YP_356189 |
Protein GI | 77918374 |
COG category | [S] Function unknown |
COG ID | [COG0585] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00094] tRNA pseudouridine synthase, TruD family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000000000000392805 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAACT ATCTAACCGC AAAGCTTCCC GGTATCGGAG GCAGCATCAA AACCTGCCCG GACGATTTCC TGGTCGAAGA ATTGCCCCTT TATCCGACCT GCGGCGAAGG CGAACACCTC TATCTGGAGG TGGAAAAACG CGGCATGACA ACCTTCGAAT TACTCAAACG TCTTTCCAGG GCACTGCAAG TCAACGAGCG CGCCATGGGG TATGCCGGGC TTAAAGACGC CCAGGCCACC ACCCGACAGT TCATTTCCGT AACCGATTGT TCCGCGGAGC AAGCCCTTGC CCTTCAACTC CAGGATATTC GTATTTTATC GGCCCGCCGC CACCGCAACA AACTGAGGCT CGGGCATCTG GCCGGCAATC GCTTCACCAT CACCATAAGG GATATCGACA GCGACGCGCT GGAAAAGGCC CGCGACATCC TCCATGTCCT GCAGATGACC GGAGTCCCCA ACTTTTTCGG CGAGCAACGC TATGGCGCAC TCGGCAACTC CCACCTCATC GGCCAGGCCA TTGTGCAGAA AAACTTTTCC CAGGCGGCAG CCCATATCAT CGGCGACCCG GACAAAATCA TCCATCCGGA GTGGCGTCAG GGCGCCATTT TGTATGCCGA AAACCGCCTG GAAGAAGCCG AACAGGCCCT GCCCCGGCGC ATGCGCAACG AACGCAACCT GGTTCGCAGC CTGCGTCAAG GCCGCAGCGC CGAAAAAGCC GTACGCCGCC TGCCGGGAAA GCTGCTGCGG CTCTACCTGT CGGCCTACCA GTCGCACCTG TTCGATCGCC TGGTCAGTAT GCGCCTTGAA AGCCTTGAAA CCCTATGGAC AGGCGACATC GCCTACAAAC ACGACAACGG CGCCTGTTTT CTGGTCACGG ATGCAGCGTT GGAGCAACCC CGGGCGGACC GGTTTGAAAT CAGCCCCACC GCGCCGTTAT TCGGCCACAA GGTCATGATG GCGGAGGCGC AGGCCGGCAT TCTGGAACAA GCCCTGCTGG CCAAAGAGGG TATTACACCG GATGATTTCC GCCTCGGAGC CGGACTTTCC ATGCCAGGCG AGCGGCGGCC GTTAAGAATC CCCATCTCCG AAACAGCCAG CAACCAGCAA GGCAACGAAC TGGAGCTGTC GTTTTCATTG CCCAAGGGCA GTTTTGCCAC AACGGTCTTA CACGAGGTCA TGAAAACAGA CGTTTAA
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Protein sequence | MANYLTAKLP GIGGSIKTCP DDFLVEELPL YPTCGEGEHL YLEVEKRGMT TFELLKRLSR ALQVNERAMG YAGLKDAQAT TRQFISVTDC SAEQALALQL QDIRILSARR HRNKLRLGHL AGNRFTITIR DIDSDALEKA RDILHVLQMT GVPNFFGEQR YGALGNSHLI GQAIVQKNFS QAAAHIIGDP DKIIHPEWRQ GAILYAENRL EEAEQALPRR MRNERNLVRS LRQGRSAEKA VRRLPGKLLR LYLSAYQSHL FDRLVSMRLE SLETLWTGDI AYKHDNGACF LVTDAALEQP RADRFEISPT APLFGHKVMM AEAQAGILEQ ALLAKEGITP DDFRLGAGLS MPGERRPLRI PISETASNQQ GNELELSFSL PKGSFATTVL HEVMKTDV
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