| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0389 |
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| Symbol | hofF |
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| ID | 3723333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 479590 |
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| End bp | 480816 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637749974 |
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| Product | general secretory pathway protein F |
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| Protein accession | YP_355819 |
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| Protein GI | 77918004 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.000000589087 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACAGT TCCGGTACCA GGCACGTAAC GCCGCAGGGG CGCTGCTCGA AGGCACCATG
GAGGCCGCCA GTGCCGCCAT GGTGGCCGAT CAGCTGCTGG GTTCCGGCTC GGCCCCGGTG
CGGATCGACG AAGAGGCCGG CAAATCGGCA GGCAAAGTGT CTCTGAATTG GCAATTCGGC
GGACGGCGTA TCGAGCCCGA GGATCTGATC CTGTTCTGCC GCCAGATGTA CAGCCTGACC
AAGGCCGGGG TGCCGTTGCT GCGCGCTTTG CGCGGCATGA CCGAGTCGGC CTGCAAGCCG
ATCATGGCCG AGACGCTGCT GGCGGTTCTC GACGATCTTG AAAGCGGGCA CGATCTGTCC
AGCGCCCTGC GGCGTCATTC CAAGGTTTTT CCGCCCCTGT TGGTCAATAT GATTCAGGTC
GGGGAGAGCA GCGGACGTCT CGACGATTCG TTCAACGAAG TGGCGACCTA CCTGATCCGC
GAAAAGCAGA CCGCCGACCA GATCAAGGCG GCCCTGCGTT ACCCGAGCTT TGTGCTGGTG
GCCATATCCA TCGCCATCGC AATCATTACG CTCTTTGTCA TACCGGCCTT CGAGAAGCTG
TTTAAAAGTC AGGGAGCCCA ATTGCCCCTG CCGACCCGTA TCATTCTCGG CATATCCAAT
TTCGCCGTGT CCTGGTGGTG GGCCATCCTT ATCGCCCTGG TGGCGGGATT TTTCGCCTGG
CGCGCCTGGA TCCGTACCGA GCAGGGCGCA CTGATCTGGG ATCGCTTCAA ATTGCGCCTG
CCGGTGGTCG GCAGCATCAT TCACCGCGCG ATTCTGGTGC GTTTCGCTCG CGGTTTCTCC
ATGGGGTACG GCGCCGGCGT TCCGCTGATC CAGTCCCTGG CCCTGACCTC CCAGGCGGTG
GGTAACAGCT ATGTGCAGCA GCGCCTCGGT GAGCTGCGGC GCGGCGTCGA GCACGGCGAT
ACCCTGACGC GCAGCGCTGC CGCCAGTGAA ATGTTCACCC CCCTGGTGTT GCAGATGCTG
GCCGTCGGTG AGGAGACCGG TGCGGTCGAT ACCATGCTGC TGGAGGTTGG TGATTTTTAC
GAACGGGAGA TCGAATACGA CATCAGCCGA TTGTCCAGCG CCATCGAACC GATCCTCATC
GTTGTCATCG GCGCCATGGT GCTGGTTCTG GCTCTGGGCG TGTTCCTGCC CATGTGGAAT
ATGGCCAGCG TCATGCGCGG GGGCTGA
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| Protein sequence | MPQFRYQARN AAGALLEGTM EAASAAMVAD QLLGSGSAPV RIDEEAGKSA GKVSLNWQFG
GRRIEPEDLI LFCRQMYSLT KAGVPLLRAL RGMTESACKP IMAETLLAVL DDLESGHDLS
SALRRHSKVF PPLLVNMIQV GESSGRLDDS FNEVATYLIR EKQTADQIKA ALRYPSFVLV
AISIAIAIIT LFVIPAFEKL FKSQGAQLPL PTRIILGISN FAVSWWWAIL IALVAGFFAW
RAWIRTEQGA LIWDRFKLRL PVVGSIIHRA ILVRFARGFS MGYGAGVPLI QSLALTSQAV
GNSYVQQRLG ELRRGVEHGD TLTRSAAASE MFTPLVLQML AVGEETGAVD TMLLEVGDFY
EREIEYDISR LSSAIEPILI VVIGAMVLVL ALGVFLPMWN MASVMRGG
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